Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 HMGN1P24-201ENST00000412282 298 ntBASIC3.29□□□□□ -1.88
SIX3O95343 MTND1P21-201ENST00000412991 285 ntBASIC3.29□□□□□ -1.88
SIX3O95343 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.29□□□□□ -1.88
SIX3O95343 UBE2FP1-201ENST00000416536 447 ntBASIC3.29□□□□□ -1.88
SIX3O95343 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.29□□□□□ -1.88
SIX3O95343 HMGN2P31-201ENST00000432430 273 ntBASIC3.29□□□□□ -1.88
SIX3O95343 UBE2FP3-201ENST00000436366 524 ntBASIC3.29□□□□□ -1.88
SIX3O95343 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.29□□□□□ -1.88
SIX3O95343 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.29□□□□□ -1.88
SIX3O95343 AC140076.1-201ENST00000449897 361 ntBASIC3.29□□□□□ -1.88
SIX3O95343 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.29□□□□□ -1.88
SIX3O95343 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.29□□□□□ -1.88
SIX3O95343 AC010468.1-201ENST00000461022 817 ntBASIC3.29□□□□□ -1.88
SIX3O95343 AC006445.2-201ENST00000510061 472 ntBASIC3.29□□□□□ -1.88
SIX3O95343 SNORA31.1-201ENST00000515993 133 ntBASIC3.29□□□□□ -1.88
SIX3O95343 SNORA31.5-201ENST00000516190 133 ntBASIC3.29□□□□□ -1.88
SIX3O95343 RN7SKP57-201ENST00000517248 293 ntBASIC3.29□□□□□ -1.88
SIX3O95343 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.29□□□□□ -1.88
SIX3O95343 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.29□□□□□ -1.88
SIX3O95343 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.29□□□□□ -1.88
SIX3O95343 EEF1A1P37-201ENST00000522748 715 ntBASIC3.29□□□□□ -1.88
SIX3O95343 AP001372.4-201ENST00000524889 472 ntBASIC3.29□□□□□ -1.88
SIX3O95343 MTATP6P15-201ENST00000527233 835 ntBASIC3.29□□□□□ -1.88
SIX3O95343 OR5B10P-201ENST00000532869 642 ntBASIC3.29□□□□□ -1.88
SIX3O95343 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.29□□□□□ -1.88
SIX3O95343 AL355836.1-201ENST00000555951 870 ntBASIC3.29□□□□□ -1.88
SIX3O95343 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.29□□□□□ -1.88
SIX3O95343 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.29□□□□□ -1.88
SIX3O95343 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.29□□□□□ -1.88
SIX3O95343 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.29□□□□□ -1.88
SIX3O95343 TPMTP1-201ENST00000592307 737 ntBASIC3.29□□□□□ -1.88
SIX3O95343 AC093424.1-201ENST00000604999 338 ntBASIC3.29□□□□□ -1.88
SIX3O95343 AC034229.4-201ENST00000607861 441 ntBASIC3.29□□□□□ -1.88
SIX3O95343 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.29□□□□□ -1.88
SIX3O95343 AC021755.4-201ENST00000616620 456 ntBASIC3.29□□□□□ -1.88
SIX3O95343 AL603758.1-201ENST00000618654 241 ntBASIC3.29□□□□□ -1.88
SIX3O95343 MIR7975-201ENST00000619350 68 ntBASIC3.29□□□□□ -1.88
SIX3O95343 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.29□□□□□ -1.88
SIX3O95343 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.29□□□□□ -1.88
SIX3O95343 AP000676.4-201ENST00000624659 623 ntBASIC3.29□□□□□ -1.88
SIX3O95343 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SIX3O95343 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SIX3O95343 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SIX3O95343 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SIX3O95343 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SIX3O95343 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.28□□□□□ -1.88
SIX3O95343 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SIX3O95343 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SIX3O95343 SNORA23-201ENST00000365128 182 ntBASIC3.28□□□□□ -1.88
SIX3O95343 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.28□□□□□ -1.88
SIX3O95343 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.28□□□□□ -1.88
SIX3O95343 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.28□□□□□ -1.88
SIX3O95343 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.28□□□□□ -1.88
SIX3O95343 AC073063.1-201ENST00000434352 607 ntBASIC3.28□□□□□ -1.88
SIX3O95343 YWHAZP7-201ENST00000436906 631 ntBASIC3.28□□□□□ -1.88
SIX3O95343 AC091862.1-201ENST00000438016 1100 ntBASIC3.28□□□□□ -1.88
SIX3O95343 OR6K1P-201ENST00000456766 971 ntBASIC3.28□□□□□ -1.88
SIX3O95343 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.28□□□□□ -1.88
SIX3O95343 AC106707.2-201ENST00000484182 374 ntBASIC3.28□□□□□ -1.88
SIX3O95343 AC112198.1-201ENST00000505369 1220 ntBASIC3.28□□□□□ -1.88
SIX3O95343 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.28□□□□□ -1.88
SIX3O95343 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.28□□□□□ -1.88
SIX3O95343 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.28□□□□□ -1.88
SIX3O95343 RNU6-390P-201ENST00000516259 103 ntBASIC3.28□□□□□ -1.88
SIX3O95343 RNU6-1256P-201ENST00000516539 103 ntBASIC3.28□□□□□ -1.88
SIX3O95343 IGKV2-26-201ENST00000518305 343 ntBASIC3.28□□□□□ -1.88
SIX3O95343 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.28□□□□□ -1.88
SIX3O95343 AP004247.1-201ENST00000531556 1289 ntBASIC3.28□□□□□ -1.88
SIX3O95343 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.28□□□□□ -1.88
SIX3O95343 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.28□□□□□ -1.88
SIX3O95343 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.28□□□□□ -1.88
SIX3O95343 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.28□□□□□ -1.88
SIX3O95343 AF038458.1-201ENST00000588406 262 ntBASIC3.28□□□□□ -1.88
SIX3O95343 ELOCP35-201ENST00000604289 336 ntBASIC3.28□□□□□ -1.88
SIX3O95343 MIR7851-201ENST00000610611 160 ntBASIC3.28□□□□□ -1.88
SIX3O95343 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.28□□□□□ -1.88
SIX3O95343 AC112204.3-201ENST00000623822 332 ntBASIC3.28□□□□□ -1.88
SIX3O95343 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
SIX3O95343 AC092125.1-201ENST00000562568 1995 ntBASIC3.28□□□□□ -1.88
SIX3O95343 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SIX3O95343 AC017071.1-201ENST00000564407 2204 ntBASIC3.28□□□□□ -1.88
SIX3O95343 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
SIX3O95343 AC104454.1-201ENST00000421341 1401 ntBASIC3.27□□□□□ -1.89
SIX3O95343 SDAD1P2-201ENST00000441308 2028 ntBASIC3.27□□□□□ -1.89
SIX3O95343 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SIX3O95343 MTND4P16-201ENST00000466108 1367 ntBASIC3.27□□□□□ -1.89
SIX3O95343 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
SIX3O95343 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
SIX3O95343 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SIX3O95343 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SIX3O95343 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SIX3O95343 AC009902.3-201ENST00000606235 2172 ntBASIC3.27□□□□□ -1.89
SIX3O95343 MIR128-1-201ENST00000384921 82 ntBASIC3.27□□□□□ -1.89
SIX3O95343 MIR514A1-201ENST00000385133 98 ntBASIC3.27□□□□□ -1.89
SIX3O95343 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.27□□□□□ -1.89
SIX3O95343 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.27□□□□□ -1.89
SIX3O95343 MIR1305-201ENST00000408300 86 ntBASIC3.27□□□□□ -1.89
SIX3O95343 RNA5SP107-201ENST00000411358 122 ntBASIC3.27□□□□□ -1.89
SIX3O95343 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SIX3O95343 AC098592.1-201ENST00000419352 333 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms