Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 MTATP6P16-201ENST00000434543 526 ntBASIC4.59□□□□□ -1.67
TRIM13O60858 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM13O60858 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.59□□□□□ -1.67
TRIM13O60858 AL118520.1-201ENST00000450770 291 ntBASIC4.59□□□□□ -1.67
TRIM13O60858 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM13O60858 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.59□□□□□ -1.67
TRIM13O60858 RNU6-1132P-201ENST00000459214 107 ntBASIC4.59□□□□□ -1.67
TRIM13O60858 BX284632.1-201ENST00000478218 541 ntBASIC4.59□□□□□ -1.67
TRIM13O60858 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.59□□□□□ -1.67
TRIM13O60858 AC012158.1-204ENST00000483430 465 ntBASIC4.59□□□□□ -1.67
TRIM13O60858 RPL23AP72-201ENST00000492447 435 ntBASIC4.59□□□□□ -1.67
TRIM13O60858 FTH1P24-201ENST00000503502 462 ntBASIC4.59□□□□□ -1.67
TRIM13O60858 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM13O60858 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.59□□□□□ -1.67
TRIM13O60858 AC091868.1-201ENST00000508746 304 ntBASIC4.59□□□□□ -1.67
TRIM13O60858 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.59□□□□□ -1.67
TRIM13O60858 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM13O60858 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.59□□□□□ -1.67
TRIM13O60858 AC128657.1-201ENST00000549459 145 ntBASIC4.59□□□□□ -1.67
TRIM13O60858 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.59□□□□□ -1.67
TRIM13O60858 RPL21P12-201ENST00000559810 515 ntBASIC4.59□□□□□ -1.67
TRIM13O60858 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.59□□□□□ -1.67
TRIM13O60858 MIR4703-201ENST00000577728 79 ntBASIC4.59□□□□□ -1.67
TRIM13O60858 AC110743.1-201ENST00000584870 478 ntBASIC4.59□□□□□ -1.67
TRIM13O60858 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM13O60858 AC005191.1-201ENST00000603950 358 ntBASIC4.59□□□□□ -1.67
TRIM13O60858 AL355297.3-201ENST00000604082 446 ntBASIC4.59□□□□□ -1.67
TRIM13O60858 OR6R2P-201ENST00000609216 300 ntBASIC4.59□□□□□ -1.67
TRIM13O60858 uc_338.12-201ENST00000616344 181 ntBASIC4.59□□□□□ -1.67
TRIM13O60858 RNU6-156P-201ENST00000621869 107 ntBASIC4.59□□□□□ -1.67
TRIM13O60858 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.59□□□□□ -1.67
TRIM13O60858 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM13O60858 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM13O60858 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM13O60858 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM13O60858 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM13O60858 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM13O60858 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM13O60858 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM13O60858 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.58□□□□□ -1.68
TRIM13O60858 RPL23P2-201ENST00000320371 421 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 RNU6-450P-201ENST00000364654 107 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 SNORD116-11-201ENST00000383882 92 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 Y_RNA.493-201ENST00000384422 102 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 Y_RNA.515-201ENST00000384535 112 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 Y_RNA.555-201ENST00000384673 110 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 MIR558-201ENST00000384920 94 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 RNU6-823P-201ENST00000391042 103 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 SNORA75.6-201ENST00000391318 127 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 ARF4P3-201ENST00000397387 509 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 AL109755.1-201ENST00000401791 649 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 MIR548I2-201ENST00000408348 149 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 RNU2-36P-201ENST00000410361 191 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM13O60858 RPL36AP36-201ENST00000418616 301 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.58□□□□□ -1.68
TRIM13O60858 PGBD4P6-201ENST00000421501 610 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 AC093156.1-201ENST00000440382 670 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 AC144530.1-201ENST00000452862 555 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 AC079168.2-201ENST00000453977 416 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 AC055855.1-201ENST00000489563 579 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 SLC25A15P5-201ENST00000508033 253 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 ATP5LP3-201ENST00000514223 304 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 RNU6-1016P-201ENST00000516689 94 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 RNU6-699P-201ENST00000517081 110 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 MTND4P7-201ENST00000523876 130 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM13O60858 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM13O60858 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM13O60858 AC018552.3-201ENST00000567416 561 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM13O60858 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM13O60858 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM13O60858 AC091178.1-203ENST00000584586 279 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 AC006116.3-201ENST00000592968 361 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.58□□□□□ -1.68
TRIM13O60858 AL354984.3-201ENST00000604803 325 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 FAM27B-201ENST00000610601 213 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 EIF3FP1-201ENST00000613970 806 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 MIR6864-201ENST00000617935 70 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 AC055839.1-201ENST00000634467 498 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 AC027290.2-201ENST00000623210 18662 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
TRIM13O60858 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM13O60858 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
TRIM13O60858 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
TRIM13O60858 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
TRIM13O60858 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.58□□□□□ -1.68
TRIM13O60858 AL450326.2-201ENST00000421913 1962 ntBASIC4.58□□□□□ -1.68
TRIM13O60858 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM13O60858 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
TRIM13O60858 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
TRIM13O60858 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.57□□□□□ -1.68
TRIM13O60858 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM13O60858 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM13O60858 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
TRIM13O60858 IRF5P1-201ENST00000504852 2164 ntBASIC4.57□□□□□ -1.68
TRIM13O60858 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms