Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 RNA5SP312-201ENST00000517068 116 ntBASIC3.19□□□□□ -1.9
SNX3O60493 AC025881.1-201ENST00000518851 512 ntBASIC3.19□□□□□ -1.9
SNX3O60493 IGHV3-76-201ENST00000522465 295 ntBASIC3.19□□□□□ -1.9
SNX3O60493 MTND4LP18-201ENST00000526864 291 ntBASIC3.19□□□□□ -1.9
SNX3O60493 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.19□□□□□ -1.9
SNX3O60493 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.19□□□□□ -1.9
SNX3O60493 MIR4700-201ENST00000578311 74 ntBASIC3.19□□□□□ -1.9
SNX3O60493 AC012119.1-201ENST00000603184 222 ntBASIC3.19□□□□□ -1.9
SNX3O60493 AC105129.3-201ENST00000605455 485 ntBASIC3.19□□□□□ -1.9
SNX3O60493 AL110115.1-201ENST00000614396 364 ntBASIC3.19□□□□□ -1.9
SNX3O60493 AC027807.2-201ENST00000616099 408 ntBASIC3.19□□□□□ -1.9
SNX3O60493 CU459211.1-201ENST00000635667 749 ntBASIC3.19□□□□□ -1.9
SNX3O60493 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SNX3O60493 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SNX3O60493 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SNX3O60493 AL355596.1-201ENST00000565399 3996 ntBASIC3.19□□□□□ -1.9
SNX3O60493 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SNX3O60493 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.18□□□□□ -1.9
SNX3O60493 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.18□□□□□ -1.9
SNX3O60493 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SNX3O60493 AL121657.1-201ENST00000327215 531 ntBASIC3.18□□□□□ -1.9
SNX3O60493 Y_RNA.46-201ENST00000362695 102 ntBASIC3.18□□□□□ -1.9
SNX3O60493 SNORA70C-201ENST00000384538 135 ntBASIC3.18□□□□□ -1.9
SNX3O60493 RNU6-754P-201ENST00000391166 107 ntBASIC3.18□□□□□ -1.9
SNX3O60493 SNORA26.8-201ENST00000391306 124 ntBASIC3.18□□□□□ -1.9
SNX3O60493 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.18□□□□□ -1.9
SNX3O60493 NPM1P11-201ENST00000417106 855 ntBASIC3.18□□□□□ -1.9
SNX3O60493 AL807761.1-201ENST00000417622 171 ntBASIC3.18□□□□□ -1.9
SNX3O60493 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.18□□□□□ -1.9
SNX3O60493 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.18□□□□□ -1.9
SNX3O60493 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.18□□□□□ -1.9
SNX3O60493 AC233728.2-201ENST00000425348 757 ntBASIC3.18□□□□□ -1.9
SNX3O60493 AL117339.2-201ENST00000430475 180 ntBASIC3.18□□□□□ -1.9
SNX3O60493 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.18□□□□□ -1.9
SNX3O60493 TRIM60P18-201ENST00000441518 828 ntBASIC3.18□□□□□ -1.9
SNX3O60493 AC118469.1-201ENST00000442943 488 ntBASIC3.18□□□□□ -1.9
SNX3O60493 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.18□□□□□ -1.9
SNX3O60493 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.18□□□□□ -1.9
SNX3O60493 AP004217.1-201ENST00000480579 346 ntBASIC3.18□□□□□ -1.9
SNX3O60493 AC055855.1-201ENST00000489563 579 ntBASIC3.18□□□□□ -1.9
SNX3O60493 AC135721.1-201ENST00000497954 479 ntBASIC3.18□□□□□ -1.9
SNX3O60493 DSTNP2-201ENST00000504533 515 ntBASIC3.18□□□□□ -1.9
SNX3O60493 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.18□□□□□ -1.9
SNX3O60493 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
SNX3O60493 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.18□□□□□ -1.9
SNX3O60493 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.18□□□□□ -1.9
SNX3O60493 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.18□□□□□ -1.9
SNX3O60493 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.18□□□□□ -1.9
SNX3O60493 RN7SKP13-201ENST00000515933 244 ntBASIC3.18□□□□□ -1.9
SNX3O60493 Y_RNA.688-201ENST00000516565 95 ntBASIC3.18□□□□□ -1.9
SNX3O60493 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.18□□□□□ -1.9
SNX3O60493 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.18□□□□□ -1.9
SNX3O60493 DEFB108D-201ENST00000527787 222 ntBASIC3.18□□□□□ -1.9
SNX3O60493 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.18□□□□□ -1.9
SNX3O60493 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.18□□□□□ -1.9
SNX3O60493 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.18□□□□□ -1.9
SNX3O60493 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.18□□□□□ -1.9
SNX3O60493 CCNG2P1-201ENST00000549521 1000 ntBASIC3.18□□□□□ -1.9
SNX3O60493 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.18□□□□□ -1.9
SNX3O60493 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.18□□□□□ -1.9
SNX3O60493 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.18□□□□□ -1.9
SNX3O60493 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.18□□□□□ -1.9
SNX3O60493 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.18□□□□□ -1.9
SNX3O60493 AL355472.4-201ENST00000610233 626 ntBASIC3.18□□□□□ -1.9
SNX3O60493 AC069234.5-201ENST00000611056 416 ntBASIC3.18□□□□□ -1.9
SNX3O60493 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.18□□□□□ -1.9
SNX3O60493 AL603758.1-201ENST00000618654 241 ntBASIC3.18□□□□□ -1.9
SNX3O60493 AC019226.1-201ENST00000625666 515 ntBASIC3.18□□□□□ -1.9
SNX3O60493 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SNX3O60493 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.18□□□□□ -1.9
SNX3O60493 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SNX3O60493 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.18□□□□□ -1.9
SNX3O60493 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SNX3O60493 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.18□□□□□ -1.9
SNX3O60493 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SNX3O60493 MTND5P7-201ENST00000413558 1798 ntBASIC3.17□□□□□ -1.9
SNX3O60493 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SNX3O60493 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SNX3O60493 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SNX3O60493 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SNX3O60493 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SNX3O60493 RNY4P24-201ENST00000362735 96 ntBASIC3.17□□□□□ -1.9
SNX3O60493 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SNX3O60493 SNORA56-201ENST00000383966 129 ntBASIC3.17□□□□□ -1.9
SNX3O60493 MIR19A-201ENST00000384878 82 ntBASIC3.17□□□□□ -1.9
SNX3O60493 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.17□□□□□ -1.9
SNX3O60493 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.17□□□□□ -1.9
SNX3O60493 UBE2D3P2-201ENST00000424409 445 ntBASIC3.17□□□□□ -1.9
SNX3O60493 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SNX3O60493 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.17□□□□□ -1.9
SNX3O60493 RPL21P89-201ENST00000444021 467 ntBASIC3.17□□□□□ -1.9
SNX3O60493 COX6CP12-201ENST00000446748 202 ntBASIC3.17□□□□□ -1.9
SNX3O60493 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.17□□□□□ -1.9
SNX3O60493 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SNX3O60493 AP000797.1-201ENST00000478870 387 ntBASIC3.17□□□□□ -1.9
SNX3O60493 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.17□□□□□ -1.9
SNX3O60493 AC010460.1-201ENST00000507087 466 ntBASIC3.17□□□□□ -1.9
SNX3O60493 AC010265.1-201ENST00000513509 211 ntBASIC3.17□□□□□ -1.9
SNX3O60493 RN7SKP122-201ENST00000515923 296 ntBASIC3.17□□□□□ -1.9
SNX3O60493 SNORA70.16-201ENST00000516390 95 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms