Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 RNU6-702P-201ENST00000364982 107 ntBASIC4.23□□□□□ -1.73
FOXS1O43638 RNU6-1040P-201ENST00000383974 107 ntBASIC4.23□□□□□ -1.73
FOXS1O43638 RNU6-601P-201ENST00000384540 107 ntBASIC4.23□□□□□ -1.73
FOXS1O43638 RNU6-310P-201ENST00000384655 107 ntBASIC4.23□□□□□ -1.73
FOXS1O43638 AL136372.1-201ENST00000403060 228 ntBASIC4.23□□□□□ -1.73
FOXS1O43638 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.23□□□□□ -1.73
FOXS1O43638 ATG3P1-201ENST00000419507 911 ntBASIC4.23□□□□□ -1.73
FOXS1O43638 AL139095.3-201ENST00000419672 1203 ntBASIC4.23□□□□□ -1.73
FOXS1O43638 RPL12P34-201ENST00000424532 479 ntBASIC4.23□□□□□ -1.73
FOXS1O43638 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.23□□□□□ -1.73
FOXS1O43638 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.23□□□□□ -1.73
FOXS1O43638 AL160004.2-201ENST00000432935 350 ntBASIC4.23□□□□□ -1.73
FOXS1O43638 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.23□□□□□ -1.73
FOXS1O43638 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.23□□□□□ -1.73
FOXS1O43638 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.23□□□□□ -1.73
FOXS1O43638 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.23□□□□□ -1.73
FOXS1O43638 RPL21P23-201ENST00000446654 460 ntBASIC4.23□□□□□ -1.73
FOXS1O43638 AC104058.1-201ENST00000448028 297 ntBASIC4.23□□□□□ -1.73
FOXS1O43638 AL354710.1-201ENST00000453641 246 ntBASIC4.23□□□□□ -1.73
FOXS1O43638 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.23□□□□□ -1.73
FOXS1O43638 snoU13.7-201ENST00000459220 104 ntBASIC4.23□□□□□ -1.73
FOXS1O43638 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
FOXS1O43638 CEACAMP10-202ENST00000495431 496 ntBASIC4.23□□□□□ -1.73
FOXS1O43638 HMGB1P21-201ENST00000502313 581 ntBASIC4.23□□□□□ -1.73
FOXS1O43638 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.23□□□□□ -1.73
FOXS1O43638 snoU109.6-201ENST00000516831 118 ntBASIC4.23□□□□□ -1.73
FOXS1O43638 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.23□□□□□ -1.73
FOXS1O43638 IGLVIV-65-201ENST00000517313 360 ntBASIC4.23□□□□□ -1.73
FOXS1O43638 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.23□□□□□ -1.73
FOXS1O43638 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.23□□□□□ -1.73
FOXS1O43638 AL133153.1-201ENST00000557756 303 ntBASIC4.23□□□□□ -1.73
FOXS1O43638 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.23□□□□□ -1.73
FOXS1O43638 MIR4284-201ENST00000578924 81 ntBASIC4.23□□□□□ -1.73
FOXS1O43638 AC138761.3-201ENST00000579993 334 ntBASIC4.23□□□□□ -1.73
FOXS1O43638 AC092747.3-201ENST00000603769 301 ntBASIC4.23□□□□□ -1.73
FOXS1O43638 MIR378J-201ENST00000611988 109 ntBASIC4.23□□□□□ -1.73
FOXS1O43638 AL590099.1-201ENST00000615276 138 ntBASIC4.23□□□□□ -1.73
FOXS1O43638 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
FOXS1O43638 AL357559.1-201ENST00000622228 274 ntBASIC4.23□□□□□ -1.73
FOXS1O43638 AC025034.2-201ENST00000623264 286 ntBASIC4.23□□□□□ -1.73
FOXS1O43638 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.23□□□□□ -1.73
FOXS1O43638 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
FOXS1O43638 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.23□□□□□ -1.73
FOXS1O43638 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
FOXS1O43638 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
FOXS1O43638 AC090337.1-201ENST00000579651 2074 ntBASIC4.23□□□□□ -1.73
FOXS1O43638 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
FOXS1O43638 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
FOXS1O43638 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
FOXS1O43638 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
FOXS1O43638 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
FOXS1O43638 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
FOXS1O43638 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.22□□□□□ -1.73
FOXS1O43638 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.22□□□□□ -1.73
FOXS1O43638 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
FOXS1O43638 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
FOXS1O43638 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.22□□□□□ -1.73
FOXS1O43638 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
FOXS1O43638 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.22□□□□□ -1.73
FOXS1O43638 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
FOXS1O43638 ZNF807-201ENST00000328088 1707 ntBASIC4.22□□□□□ -1.73
FOXS1O43638 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
FOXS1O43638 Y_RNA.188-201ENST00000363952 111 ntBASIC4.22□□□□□ -1.73
FOXS1O43638 RNU6-61P-201ENST00000365528 109 ntBASIC4.22□□□□□ -1.73
FOXS1O43638 RNU5E-6P-201ENST00000365574 115 ntBASIC4.22□□□□□ -1.73
FOXS1O43638 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
FOXS1O43638 SNORD116-11-201ENST00000383882 92 ntBASIC4.22□□□□□ -1.73
FOXS1O43638 Y_RNA.557-201ENST00000384680 107 ntBASIC4.22□□□□□ -1.73
FOXS1O43638 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
FOXS1O43638 RNU2-36P-201ENST00000410361 191 ntBASIC4.22□□□□□ -1.73
FOXS1O43638 RNU4-46P-201ENST00000410818 138 ntBASIC4.22□□□□□ -1.73
FOXS1O43638 Y_RNA.646-201ENST00000410980 101 ntBASIC4.22□□□□□ -1.73
FOXS1O43638 HMGB3P2-201ENST00000411913 584 ntBASIC4.22□□□□□ -1.73
FOXS1O43638 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.22□□□□□ -1.73
FOXS1O43638 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.22□□□□□ -1.73
FOXS1O43638 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.22□□□□□ -1.73
FOXS1O43638 USP9YP16-201ENST00000430287 407 ntBASIC4.22□□□□□ -1.73
FOXS1O43638 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.22□□□□□ -1.73
FOXS1O43638 RPL12P18-201ENST00000437175 325 ntBASIC4.22□□□□□ -1.73
FOXS1O43638 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.22□□□□□ -1.73
FOXS1O43638 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.22□□□□□ -1.73
FOXS1O43638 USP9YP23-201ENST00000455085 407 ntBASIC4.22□□□□□ -1.73
FOXS1O43638 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.22□□□□□ -1.73
FOXS1O43638 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.22□□□□□ -1.73
FOXS1O43638 NIP7P2-201ENST00000485801 544 ntBASIC4.22□□□□□ -1.73
FOXS1O43638 RPL30P11-201ENST00000495304 339 ntBASIC4.22□□□□□ -1.73
FOXS1O43638 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.22□□□□□ -1.73
FOXS1O43638 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.22□□□□□ -1.73
FOXS1O43638 SNORA25.10-201ENST00000515926 124 ntBASIC4.22□□□□□ -1.73
FOXS1O43638 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.22□□□□□ -1.73
FOXS1O43638 AL161670.1-201ENST00000554348 137 ntBASIC4.22□□□□□ -1.73
FOXS1O43638 AC010653.1-201ENST00000571108 881 ntBASIC4.22□□□□□ -1.73
FOXS1O43638 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.22□□□□□ -1.73
FOXS1O43638 AL669831.4-202ENST00000590817 238 ntBASIC4.22□□□□□ -1.73
FOXS1O43638 HMGB2P1-201ENST00000591146 634 ntBASIC4.22□□□□□ -1.73
FOXS1O43638 MIR6864-201ENST00000617935 70 ntBASIC4.22□□□□□ -1.73
FOXS1O43638 AC103705.1-201ENST00000619013 241 ntBASIC4.22□□□□□ -1.73
FOXS1O43638 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.22□□□□□ -1.73
FOXS1O43638 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
FOXS1O43638 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms