Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AL137847.3-201ENST00000611521 109 ntBASIC2.3□□□□□ -2.04
SGCEO43556 DUXAP10-204ENST00000612052 616 ntBASIC2.3□□□□□ -2.04
SGCEO43556 AL592148.2-201ENST00000612210 372 ntBASIC2.3□□□□□ -2.04
SGCEO43556 AC079395.3-201ENST00000615161 484 ntBASIC2.3□□□□□ -2.04
SGCEO43556 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
SGCEO43556 MTND4P21-201ENST00000453886 1357 ntBASIC2.3□□□□□ -2.04
SGCEO43556 AC012321.1-201ENST00000561622 1588 ntBASIC2.3□□□□□ -2.04
SGCEO43556 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
SGCEO43556 AL359693.1-201ENST00000614959 2407 ntBASIC2.3□□□□□ -2.04
SGCEO43556 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.3□□□□□ -2.04
SGCEO43556 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
SGCEO43556 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SGCEO43556 RNU6-859P-201ENST00000362728 107 ntBASIC2.29□□□□□ -2.04
SGCEO43556 RNU6-353P-201ENST00000364266 108 ntBASIC2.29□□□□□ -2.04
SGCEO43556 RNU1-100P-201ENST00000365255 165 ntBASIC2.29□□□□□ -2.04
SGCEO43556 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SGCEO43556 RNA5SP210-201ENST00000391034 120 ntBASIC2.29□□□□□ -2.04
SGCEO43556 AL360182.1-201ENST00000397433 468 ntBASIC2.29□□□□□ -2.04
SGCEO43556 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.29□□□□□ -2.04
SGCEO43556 BOLA3P4-201ENST00000418151 400 ntBASIC2.29□□□□□ -2.04
SGCEO43556 AC092634.6-201ENST00000418558 192 ntBASIC2.29□□□□□ -2.04
SGCEO43556 MTCO3P1-205ENST00000422088 832 ntBASIC2.29□□□□□ -2.04
SGCEO43556 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.29□□□□□ -2.04
SGCEO43556 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.29□□□□□ -2.04
SGCEO43556 AL445687.1-201ENST00000439946 251 ntBASIC2.29□□□□□ -2.04
SGCEO43556 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.29□□□□□ -2.04
SGCEO43556 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.29□□□□□ -2.04
SGCEO43556 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.29□□□□□ -2.04
SGCEO43556 AC091860.1-201ENST00000505723 432 ntBASIC2.29□□□□□ -2.04
SGCEO43556 AC113155.1-201ENST00000511141 769 ntBASIC2.29□□□□□ -2.04
SGCEO43556 AC096725.1-201ENST00000514266 313 ntBASIC2.29□□□□□ -2.04
SGCEO43556 AC026801.2-201ENST00000515352 425 ntBASIC2.29□□□□□ -2.04
SGCEO43556 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.29□□□□□ -2.04
SGCEO43556 COX6CP5-201ENST00000527162 228 ntBASIC2.29□□□□□ -2.04
SGCEO43556 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SGCEO43556 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.29□□□□□ -2.04
SGCEO43556 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.29□□□□□ -2.04
SGCEO43556 GLYCAM1-201ENST00000546596 285 ntBASIC2.29□□□□□ -2.04
SGCEO43556 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.29□□□□□ -2.04
SGCEO43556 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.29□□□□□ -2.04
SGCEO43556 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.29□□□□□ -2.04
SGCEO43556 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC2.29□□□□□ -2.04
SGCEO43556 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.29□□□□□ -2.04
SGCEO43556 AP003973.1-201ENST00000604639 691 ntBASIC2.29□□□□□ -2.04
SGCEO43556 ATP1B3P1-201ENST00000605365 821 ntBASIC2.29□□□□□ -2.04
SGCEO43556 AC092954.1-201ENST00000609121 445 ntBASIC2.29□□□□□ -2.04
SGCEO43556 AC006386.2-201ENST00000624491 75 ntBASIC2.29□□□□□ -2.04
SGCEO43556 AC012005.1-201ENST00000624575 75 ntBASIC2.29□□□□□ -2.04
SGCEO43556 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.29□□□□□ -2.04
SGCEO43556 AP003399.1-201ENST00000637534 361 ntBASIC2.29□□□□□ -2.04
SGCEO43556 AC080100.1-201ENST00000624239 5356 ntBASIC2.29□□□□□ -2.04
SGCEO43556 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.29□□□□□ -2.04
SGCEO43556 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.28□□□□□ -2.04
SGCEO43556 AL365361.1-201ENST00000566942 3481 ntBASIC2.28□□□□□ -2.04
SGCEO43556 OR5J1P-201ENST00000313544 939 ntBASIC2.28□□□□□ -2.04
SGCEO43556 SNORA68.1-201ENST00000364537 132 ntBASIC2.28□□□□□ -2.04
SGCEO43556 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SGCEO43556 AL356057.3-201ENST00000402607 340 ntBASIC2.28□□□□□ -2.04
SGCEO43556 AL513475.1-201ENST00000406602 315 ntBASIC2.28□□□□□ -2.04
SGCEO43556 Z92545.1-201ENST00000411782 234 ntBASIC2.28□□□□□ -2.04
SGCEO43556 AC007064.1-201ENST00000412238 351 ntBASIC2.28□□□□□ -2.04
SGCEO43556 RPLP0P7-201ENST00000416050 667 ntBASIC2.28□□□□□ -2.04
SGCEO43556 SPA17P1-201ENST00000416656 452 ntBASIC2.28□□□□□ -2.04
SGCEO43556 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.28□□□□□ -2.04
SGCEO43556 NDUFB4P7-201ENST00000423198 363 ntBASIC2.28□□□□□ -2.04
SGCEO43556 RAC1P8-201ENST00000427086 527 ntBASIC2.28□□□□□ -2.04
SGCEO43556 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.28□□□□□ -2.04
SGCEO43556 RPL26P6-201ENST00000440913 438 ntBASIC2.28□□□□□ -2.04
SGCEO43556 AC011816.1-201ENST00000441346 546 ntBASIC2.28□□□□□ -2.04
SGCEO43556 AC025750.2-201ENST00000442609 450 ntBASIC2.28□□□□□ -2.04
SGCEO43556 MTCYBP3-201ENST00000445588 1137 ntBASIC2.28□□□□□ -2.04
SGCEO43556 WASF1P1-201ENST00000447560 1131 ntBASIC2.28□□□□□ -2.04
SGCEO43556 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SGCEO43556 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.28□□□□□ -2.04
SGCEO43556 MTND2P3-201ENST00000452458 470 ntBASIC2.28□□□□□ -2.04
SGCEO43556 USP9YP34-201ENST00000453983 808 ntBASIC2.28□□□□□ -2.04
SGCEO43556 TPRKBP1-201ENST00000456243 481 ntBASIC2.28□□□□□ -2.04
SGCEO43556 SUMO2P2-201ENST00000456482 255 ntBASIC2.28□□□□□ -2.04
SGCEO43556 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SGCEO43556 AC126182.1-201ENST00000478134 357 ntBASIC2.28□□□□□ -2.04
SGCEO43556 AC023424.2-201ENST00000493479 777 ntBASIC2.28□□□□□ -2.04
SGCEO43556 RPS27P27-201ENST00000498779 255 ntBASIC2.28□□□□□ -2.04
SGCEO43556 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.28□□□□□ -2.04
SGCEO43556 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.28□□□□□ -2.04
SGCEO43556 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.28□□□□□ -2.04
SGCEO43556 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.28□□□□□ -2.04
SGCEO43556 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.28□□□□□ -2.04
SGCEO43556 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.28□□□□□ -2.04
SGCEO43556 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.28□□□□□ -2.04
SGCEO43556 RN7SKP132-201ENST00000516001 208 ntBASIC2.28□□□□□ -2.04
SGCEO43556 SNORA31.18-201ENST00000517043 134 ntBASIC2.28□□□□□ -2.04
SGCEO43556 AC103783.1-201ENST00000520506 373 ntBASIC2.28□□□□□ -2.04
SGCEO43556 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
SGCEO43556 GTF3AP2-201ENST00000557014 266 ntBASIC2.28□□□□□ -2.04
SGCEO43556 AC093510.2-201ENST00000562820 896 ntBASIC2.28□□□□□ -2.04
SGCEO43556 LARP7P3-201ENST00000579888 337 ntBASIC2.28□□□□□ -2.04
SGCEO43556 AC124283.4-201ENST00000581815 456 ntBASIC2.28□□□□□ -2.04
SGCEO43556 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.28□□□□□ -2.04
SGCEO43556 BNIP3P24-201ENST00000593398 557 ntBASIC2.28□□□□□ -2.04
SGCEO43556 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms