Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 RN7SL432P-201ENST00000484057 298 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.08□□□□□ -1.76
PHGDHO43175 RPL31P61-201ENST00000496160 376 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.08□□□□□ -1.76
PHGDHO43175 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PHGDHO43175 HSPD1P15-201ENST00000505573 1122 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.08□□□□□ -1.76
PHGDHO43175 EXOC5P1-201ENST00000510543 1969 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 RNU7-143P-201ENST00000516781 65 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 RNU6-1092P-201ENST00000516955 87 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.08□□□□□ -1.76
PHGDHO43175 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.08□□□□□ -1.76
PHGDHO43175 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.08□□□□□ -1.76
PHGDHO43175 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PHGDHO43175 AP004242.1-201ENST00000533701 349 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 AL512310.1-201ENST00000548639 172 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 AL157687.1-201ENST00000554853 619 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 AL133241.1-201ENST00000556832 487 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 MED28P6-201ENST00000558776 231 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PHGDHO43175 AC025678.1-201ENST00000567861 338 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.08□□□□□ -1.76
PHGDHO43175 HMGB1P50-201ENST00000605814 607 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 AP001330.5-201ENST00000607176 411 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 AP001596.2-201ENST00000608410 312 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 AC010133.1-201ENST00000615809 842 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
PHGDHO43175 AP000346.3-201ENST00000622821 210 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 AP005264.7-201ENST00000625003 745 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.08□□□□□ -1.76
PHGDHO43175 MIR3688-2-201ENST00000636963 87 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
PHGDHO43175 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PHGDHO43175 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
PHGDHO43175 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
PHGDHO43175 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PHGDHO43175 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PHGDHO43175 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PHGDHO43175 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PHGDHO43175 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PHGDHO43175 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PHGDHO43175 RNA5SP502-201ENST00000362694 119 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 RNU6-1090P-201ENST00000364065 94 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 RNU6-1322P-201ENST00000364309 107 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 Y_RNA.381-201ENST00000365666 102 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 Y_RNA.453-201ENST00000384223 109 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 FAR2P2-201ENST00000413041 594 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 USP9YP27-201ENST00000418455 438 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.07□□□□□ -1.76
PHGDHO43175 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.07□□□□□ -1.76
PHGDHO43175 RAC1P6-201ENST00000423911 575 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.07□□□□□ -1.76
PHGDHO43175 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PHGDHO43175 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.07□□□□□ -1.76
PHGDHO43175 HMGB3P12-201ENST00000438745 556 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.07□□□□□ -1.76
PHGDHO43175 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.07□□□□□ -1.76
PHGDHO43175 FGF7P6-202ENST00000451282 293 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 MTCO3P38-201ENST00000468910 766 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.07□□□□□ -1.76
PHGDHO43175 HSPE1P6-201ENST00000479457 291 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 AC041039.1-201ENST00000485656 536 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 AC083829.1-201ENST00000503756 657 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.07□□□□□ -1.76
PHGDHO43175 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.07□□□□□ -1.76
PHGDHO43175 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.07□□□□□ -1.76
PHGDHO43175 AL360157.1-201ENST00000565962 87 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 HMGB1P6-201ENST00000569046 646 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.07□□□□□ -1.76
PHGDHO43175 SNORA59B-202ENST00000578183 701 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 ELOCP28-201ENST00000590044 317 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.07□□□□□ -1.76
PHGDHO43175 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.07□□□□□ -1.76
PHGDHO43175 AL670379.6-201ENST00000603753 252 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 AL670379.11-201ENST00000604059 253 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 AC104662.1-201ENST00000604448 511 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 AC007621.1-201ENST00000604544 437 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 AC008162.1-201ENST00000604718 254 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 AL670379.1-201ENST00000604752 252 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 AL670379.5-201ENST00000605253 252 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 AL670379.12-201ENST00000605291 253 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 AL670379.8-201ENST00000605353 252 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 AL670379.7-201ENST00000605823 252 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.07□□□□□ -1.76
PHGDHO43175 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.07□□□□□ -1.76
PHGDHO43175 AL356321.1-201ENST00000621360 228 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 AC005609.4-201ENST00000625071 447 ntBASIC4.07□□□□□ -1.76
PHGDHO43175 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PHGDHO43175 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PHGDHO43175 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.07□□□□□ -1.76
PHGDHO43175 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PHGDHO43175 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PHGDHO43175 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PHGDHO43175 USP8P1-201ENST00000494673 3183 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PHGDHO43175 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PHGDHO43175 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PHGDHO43175 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms