Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.37□□□□□ -1.87
TO15178 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TO15178 RPL21P17-201ENST00000397467 475 ntBASIC3.37□□□□□ -1.87
TO15178 AL136372.1-201ENST00000403060 228 ntBASIC3.37□□□□□ -1.87
TO15178 Y_RNA.598-201ENST00000410480 95 ntBASIC3.37□□□□□ -1.87
TO15178 RN7SKP142-201ENST00000411236 328 ntBASIC3.37□□□□□ -1.87
TO15178 RN7SKP53-201ENST00000411337 315 ntBASIC3.37□□□□□ -1.87
TO15178 AC078974.1-201ENST00000411597 223 ntBASIC3.37□□□□□ -1.87
TO15178 ATP5A1P2-201ENST00000412323 255 ntBASIC3.37□□□□□ -1.87
TO15178 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.37□□□□□ -1.87
TO15178 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.37□□□□□ -1.87
TO15178 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TO15178 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.37□□□□□ -1.87
TO15178 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.37□□□□□ -1.87
TO15178 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.37□□□□□ -1.87
TO15178 AL356583.2-201ENST00000426536 280 ntBASIC3.37□□□□□ -1.87
TO15178 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.37□□□□□ -1.87
TO15178 RPS3AP46-201ENST00000448352 682 ntBASIC3.37□□□□□ -1.87
TO15178 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.37□□□□□ -1.87
TO15178 RPL7P15-201ENST00000461190 712 ntBASIC3.37□□□□□ -1.87
TO15178 ACTR3P3-201ENST00000480448 893 ntBASIC3.37□□□□□ -1.87
TO15178 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.37□□□□□ -1.87
TO15178 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.37□□□□□ -1.87
TO15178 HMGN1P11-201ENST00000508668 303 ntBASIC3.37□□□□□ -1.87
TO15178 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.37□□□□□ -1.87
TO15178 RN7SKP83-201ENST00000516512 178 ntBASIC3.37□□□□□ -1.87
TO15178 RNU6-579P-201ENST00000516879 102 ntBASIC3.37□□□□□ -1.87
TO15178 RNU6-798P-201ENST00000516912 103 ntBASIC3.37□□□□□ -1.87
TO15178 PAICSP4-201ENST00000517543 1253 ntBASIC3.37□□□□□ -1.87
TO15178 AC022690.1-201ENST00000526681 550 ntBASIC3.37□□□□□ -1.87
TO15178 AL391156.1-201ENST00000554965 554 ntBASIC3.37□□□□□ -1.87
TO15178 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.37□□□□□ -1.87
TO15178 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.37□□□□□ -1.87
TO15178 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.37□□□□□ -1.87
TO15178 AC012414.6-201ENST00000568241 401 ntBASIC3.37□□□□□ -1.87
TO15178 AP005136.1-201ENST00000579765 429 ntBASIC3.37□□□□□ -1.87
TO15178 MIR548AB-201ENST00000584917 84 ntBASIC3.37□□□□□ -1.87
TO15178 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.37□□□□□ -1.87
TO15178 AC073544.2-201ENST00000601155 540 ntBASIC3.37□□□□□ -1.87
TO15178 AC239868.4-201ENST00000608318 671 ntBASIC3.37□□□□□ -1.87
TO15178 RMST_8.1-201ENST00000610287 165 ntBASIC3.37□□□□□ -1.87
TO15178 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.37□□□□□ -1.87
TO15178 AC025594.3-201ENST00000613068 790 ntBASIC3.37□□□□□ -1.87
TO15178 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.37□□□□□ -1.87
TO15178 AC012150.2-201ENST00000621300 544 ntBASIC3.37□□□□□ -1.87
TO15178 AC009878.1-201ENST00000621819 340 ntBASIC3.37□□□□□ -1.87
TO15178 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.37□□□□□ -1.87
TO15178 MIR4275-201ENST00000636486 87 ntBASIC3.37□□□□□ -1.87
TO15178 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.37□□□□□ -1.87
TO15178 AL732372.2-225ENST00000642124 456 ntBASIC3.37□□□□□ -1.87
TO15178 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TO15178 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TO15178 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TO15178 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
TO15178 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TO15178 AC110774.1-201ENST00000623567 2018 ntBASIC3.36□□□□□ -1.87
TO15178 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
TO15178 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.36□□□□□ -1.87
TO15178 FGF7P2-201ENST00000332473 296 ntBASIC3.36□□□□□ -1.87
TO15178 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
TO15178 RNA5SP51-201ENST00000364750 119 ntBASIC3.36□□□□□ -1.87
TO15178 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TO15178 RNU6-754P-201ENST00000391166 107 ntBASIC3.36□□□□□ -1.87
TO15178 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.36□□□□□ -1.87
TO15178 RPL7P25-201ENST00000404151 721 ntBASIC3.36□□□□□ -1.87
TO15178 RPS3AP24-201ENST00000407896 734 ntBASIC3.36□□□□□ -1.87
TO15178 Y_RNA.608-201ENST00000410647 95 ntBASIC3.36□□□□□ -1.87
TO15178 RPS7P13-201ENST00000413955 498 ntBASIC3.36□□□□□ -1.87
TO15178 AL035423.1-201ENST00000420331 213 ntBASIC3.36□□□□□ -1.87
TO15178 RPS15AP6-201ENST00000420703 385 ntBASIC3.36□□□□□ -1.87
TO15178 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.36□□□□□ -1.87
TO15178 MTCO2P16-201ENST00000436962 677 ntBASIC3.36□□□□□ -1.87
TO15178 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.36□□□□□ -1.87
TO15178 AL133547.1-201ENST00000448546 220 ntBASIC3.36□□□□□ -1.87
TO15178 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.36□□□□□ -1.87
TO15178 SNORD105B-201ENST00000458770 79 ntBASIC3.36□□□□□ -1.87
TO15178 MTND4LP3-201ENST00000468320 276 ntBASIC3.36□□□□□ -1.87
TO15178 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.36□□□□□ -1.87
TO15178 RPS3AP50-201ENST00000487064 803 ntBASIC3.36□□□□□ -1.87
TO15178 AC055855.1-201ENST00000489563 579 ntBASIC3.36□□□□□ -1.87
TO15178 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.36□□□□□ -1.87
TO15178 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.36□□□□□ -1.87
TO15178 PHBP14-201ENST00000512887 367 ntBASIC3.36□□□□□ -1.87
TO15178 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.36□□□□□ -1.87
TO15178 SNORA31.8-201ENST00000516327 108 ntBASIC3.36□□□□□ -1.87
TO15178 SNORD59.2-201ENST00000516873 68 ntBASIC3.36□□□□□ -1.87
TO15178 ERHP1-201ENST00000523006 310 ntBASIC3.36□□□□□ -1.87
TO15178 AP001804.3-201ENST00000525146 880 ntBASIC3.36□□□□□ -1.87
TO15178 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.36□□□□□ -1.87
TO15178 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.36□□□□□ -1.87
TO15178 AC022878.1-201ENST00000530684 149 ntBASIC3.36□□□□□ -1.87
TO15178 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.36□□□□□ -1.87
TO15178 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.36□□□□□ -1.87
TO15178 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.36□□□□□ -1.87
TO15178 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.36□□□□□ -1.87
TO15178 AC099489.2-201ENST00000574976 260 ntBASIC3.36□□□□□ -1.87
TO15178 AP001981.2-201ENST00000603241 418 ntBASIC3.36□□□□□ -1.87
TO15178 AC112191.3-201ENST00000604371 277 ntBASIC3.36□□□□□ -1.87
TO15178 AC004908.2-201ENST00000609090 574 ntBASIC3.36□□□□□ -1.87
TO15178 AC104010.1-201ENST00000616889 150 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms