Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC113368.1-201ENST00000603736 382 ntBASIC2.58□□□□□ -2
CHD1O14646 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.58□□□□□ -2
CHD1O14646 SSXP9-201ENST00000417503 292 ntBASIC2.57□□□□□ -2
CHD1O14646 MTND2P29-201ENST00000438595 412 ntBASIC2.57□□□□□ -2
CHD1O14646 AC079203.1-201ENST00000487972 404 ntBASIC2.57□□□□□ -2
CHD1O14646 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.57□□□□□ -2
CHD1O14646 AL121839.1-201ENST00000556233 1185 ntBASIC2.57□□□□□ -2
CHD1O14646 TRAV28-201ENST00000557548 323 ntBASIC2.57□□□□□ -2
CHD1O14646 AL589935.2-201ENST00000616471 1231 ntBASIC2.57□□□□□ -2
CHD1O14646 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
CHD1O14646 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.57□□□□□ -2
CHD1O14646 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CHD1O14646 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.56□□□□□ -2
CHD1O14646 XKRYP6-201ENST00000440468 1116 ntBASIC2.56□□□□□ -2
CHD1O14646 XKRYP3-201ENST00000442113 1116 ntBASIC2.56□□□□□ -2
CHD1O14646 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.56□□□□□ -2
CHD1O14646 LDHBP3-201ENST00000514909 822 ntBASIC2.56□□□□□ -2
CHD1O14646 AP005660.1-201ENST00000522972 293 ntBASIC2.56□□□□□ -2
CHD1O14646 AL121594.5-201ENST00000631724 573 ntBASIC2.56□□□□□ -2
CHD1O14646 AL133216.2-202ENST00000634512 349 ntBASIC2.56□□□□□ -2
CHD1O14646 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.56□□□□□ -2
CHD1O14646 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CHD1O14646 MIR598-201ENST00000384868 97 ntBASIC2.56□□□□□ -2
CHD1O14646 SETP2-201ENST00000553886 926 ntBASIC2.56□□□□□ -2
CHD1O14646 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.56□□□□□ -2
CHD1O14646 AC080078.3-201ENST00000605407 463 ntBASIC2.56□□□□□ -2
CHD1O14646 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
CHD1O14646 SRIP3-201ENST00000413200 219 ntBASIC2.55□□□□□ -2
CHD1O14646 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.55□□□□□ -2
CHD1O14646 AL513321.1-201ENST00000441175 761 ntBASIC2.55□□□□□ -2
CHD1O14646 CASP3P1-201ENST00000446037 609 ntBASIC2.55□□□□□ -2
CHD1O14646 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.55□□□□□ -2
CHD1O14646 AC007375.1-201ENST00000554513 578 ntBASIC2.55□□□□□ -2
CHD1O14646 ZNF209P-201ENST00000593450 2304 ntBASIC2.55□□□□□ -2
CHD1O14646 MTCO1P4-201ENST00000520516 1409 ntBASIC2.55□□□□□ -2
CHD1O14646 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.55□□□□□ -2
CHD1O14646 AC121333.1-201ENST00000567488 2709 ntBASIC2.55□□□□□ -2
CHD1O14646 MTND4P34-201ENST00000572715 1371 ntBASIC2.54□□□□□ -2
CHD1O14646 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.54□□□□□ -2
CHD1O14646 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.54□□□□□ -2
CHD1O14646 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.54□□□□□ -2
CHD1O14646 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.54□□□□□ -2
CHD1O14646 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.54□□□□□ -2
CHD1O14646 RPS29P1-201ENST00000465274 159 ntBASIC2.54□□□□□ -2
CHD1O14646 YWHAQP7-201ENST00000603536 658 ntBASIC2.54□□□□□ -2
CHD1O14646 AC004241.3-201ENST00000611728 517 ntBASIC2.54□□□□□ -2
CHD1O14646 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CHD1O14646 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.54□□□□□ -2
CHD1O14646 AC013268.2-201ENST00000420753 337 ntBASIC2.54□□□□□ -2
CHD1O14646 AC005517.2-201ENST00000424673 553 ntBASIC2.54□□□□□ -2
CHD1O14646 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.54□□□□□ -2
CHD1O14646 RNU4ATAC11P-201ENST00000515939 126 ntBASIC2.54□□□□□ -2
CHD1O14646 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC2.54□□□□□ -2
CHD1O14646 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.54□□□□□ -2
CHD1O14646 MIR4446-201ENST00000578505 67 ntBASIC2.54□□□□□ -2
CHD1O14646 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.54□□□□□ -2
CHD1O14646 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.53□□□□□ -2
CHD1O14646 Y_RNA.36-201ENST00000362602 112 ntBASIC2.53□□□□□ -2
CHD1O14646 RNU4-51P-201ENST00000364206 140 ntBASIC2.53□□□□□ -2
CHD1O14646 Y_RNA.295-201ENST00000364918 102 ntBASIC2.53□□□□□ -2
CHD1O14646 RNU1-109P-201ENST00000383960 147 ntBASIC2.53□□□□□ -2
CHD1O14646 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.53□□□□□ -2
CHD1O14646 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.53□□□□□ -2
CHD1O14646 MTCYBP37-201ENST00000510642 1133 ntBASIC2.53□□□□□ -2
CHD1O14646 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC2.53□□□□□ -2
CHD1O14646 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.53□□□□□ -2
CHD1O14646 MTATP6P3-201ENST00000581686 676 ntBASIC2.53□□□□□ -2
CHD1O14646 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.53□□□□□ -2
CHD1O14646 AC073464.3-201ENST00000422564 712 ntBASIC2.52□□□□□ -2.01
CHD1O14646 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.52□□□□□ -2.01
CHD1O14646 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.52□□□□□ -2.01
CHD1O14646 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.52□□□□□ -2.01
CHD1O14646 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.52□□□□□ -2.01
CHD1O14646 AC091057.2-201ENST00000602594 792 ntBASIC2.52□□□□□ -2.01
CHD1O14646 AL121917.1-203ENST00000605534 577 ntBASIC2.52□□□□□ -2.01
CHD1O14646 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.52□□□□□ -2.01
CHD1O14646 FO624990.1-201ENST00000636373 85 ntBASIC2.52□□□□□ -2.01
CHD1O14646 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CHD1O14646 CDC27P3-201ENST00000635418 1910 ntBASIC2.52□□□□□ -2.01
CHD1O14646 RNU1-22P-201ENST00000363334 158 ntBASIC2.51□□□□□ -2.01
CHD1O14646 RFESDP1-201ENST00000422350 461 ntBASIC2.51□□□□□ -2.01
CHD1O14646 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.51□□□□□ -2.01
CHD1O14646 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.51□□□□□ -2.01
CHD1O14646 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.51□□□□□ -2.01
CHD1O14646 NOP56P3-201ENST00000549457 385 ntBASIC2.51□□□□□ -2.01
CHD1O14646 AC008687.2-201ENST00000597865 520 ntBASIC2.51□□□□□ -2.01
CHD1O14646 AC034102.8-201ENST00000615146 484 ntBASIC2.51□□□□□ -2.01
CHD1O14646 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.51□□□□□ -2.01
CHD1O14646 U73479.1-201ENST00000618062 168 ntBASIC2.51□□□□□ -2.01
CHD1O14646 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
CHD1O14646 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.51□□□□□ -2.01
CHD1O14646 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.51□□□□□ -2.01
CHD1O14646 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.51□□□□□ -2.01
CHD1O14646 MTCYBP7-201ENST00000419540 1134 ntBASIC2.51□□□□□ -2.01
CHD1O14646 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.51□□□□□ -2.01
CHD1O14646 SUMO1P4-201ENST00000429430 302 ntBASIC2.51□□□□□ -2.01
CHD1O14646 AC023424.2-201ENST00000493479 777 ntBASIC2.51□□□□□ -2.01
CHD1O14646 AC090071.1-201ENST00000507713 644 ntBASIC2.51□□□□□ -2.01
CHD1O14646 SNORA31.24-201ENST00000517232 57 ntBASIC2.51□□□□□ -2.01
CHD1O14646 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms