Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.81□□□□□ -2.12
SDCBPO00560 Y_RNA.510-201ENST00000384511 114 ntBASIC1.81□□□□□ -2.12
SDCBPO00560 BTF3P7-201ENST00000407097 488 ntBASIC1.81□□□□□ -2.12
SDCBPO00560 HMGB3P2-201ENST00000411913 584 ntBASIC1.81□□□□□ -2.12
SDCBPO00560 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.81□□□□□ -2.12
SDCBPO00560 AC005005.2-201ENST00000420779 380 ntBASIC1.81□□□□□ -2.12
SDCBPO00560 AC233981.1-201ENST00000423224 461 ntBASIC1.81□□□□□ -2.12
SDCBPO00560 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.81□□□□□ -2.12
SDCBPO00560 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.81□□□□□ -2.12
SDCBPO00560 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.81□□□□□ -2.12
SDCBPO00560 RPS20P24-201ENST00000457473 361 ntBASIC1.81□□□□□ -2.12
SDCBPO00560 PNPLA4P1-201ENST00000458328 305 ntBASIC1.81□□□□□ -2.12
SDCBPO00560 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.81□□□□□ -2.12
SDCBPO00560 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.81□□□□□ -2.12
SDCBPO00560 AC069306.1-201ENST00000507006 843 ntBASIC1.81□□□□□ -2.12
SDCBPO00560 AC027309.2-201ENST00000520566 192 ntBASIC1.81□□□□□ -2.12
SDCBPO00560 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.81□□□□□ -2.12
SDCBPO00560 AC233266.2-201ENST00000567067 528 ntBASIC1.81□□□□□ -2.12
SDCBPO00560 AC010546.1-201ENST00000569391 485 ntBASIC1.81□□□□□ -2.12
SDCBPO00560 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC1.81□□□□□ -2.12
SDCBPO00560 AC002984.1-201ENST00000591692 448 ntBASIC1.81□□□□□ -2.12
SDCBPO00560 VN1R78P-201ENST00000597393 564 ntBASIC1.81□□□□□ -2.12
SDCBPO00560 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.81□□□□□ -2.12
SDCBPO00560 AC009318.4-201ENST00000620496 486 ntBASIC1.81□□□□□ -2.12
SDCBPO00560 AC104820.1-201ENST00000624183 307 ntBASIC1.81□□□□□ -2.12
SDCBPO00560 AC068880.5-201ENST00000624331 290 ntBASIC1.81□□□□□ -2.12
SDCBPO00560 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.81□□□□□ -2.12
SDCBPO00560 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SDCBPO00560 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SDCBPO00560 ZNF519P1-201ENST00000449011 1626 ntBASIC1.8□□□□□ -2.12
SDCBPO00560 RNA5SP138-201ENST00000365098 114 ntBASIC1.8□□□□□ -2.12
SDCBPO00560 TAS2R15P-201ENST00000390674 928 ntBASIC1.8□□□□□ -2.12
SDCBPO00560 AL136372.1-201ENST00000403060 228 ntBASIC1.8□□□□□ -2.12
SDCBPO00560 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.8□□□□□ -2.12
SDCBPO00560 TATDN1P1-201ENST00000414123 891 ntBASIC1.8□□□□□ -2.12
SDCBPO00560 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.8□□□□□ -2.12
SDCBPO00560 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.8□□□□□ -2.12
SDCBPO00560 MTND4LP7-201ENST00000431728 294 ntBASIC1.8□□□□□ -2.12
SDCBPO00560 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.8□□□□□ -2.12
SDCBPO00560 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
SDCBPO00560 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.8□□□□□ -2.12
SDCBPO00560 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.8□□□□□ -2.12
SDCBPO00560 AC007000.2-201ENST00000442564 487 ntBASIC1.8□□□□□ -2.12
SDCBPO00560 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.8□□□□□ -2.12
SDCBPO00560 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.8□□□□□ -2.12
SDCBPO00560 HMGN3P1-201ENST00000453847 193 ntBASIC1.8□□□□□ -2.12
SDCBPO00560 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.8□□□□□ -2.12
SDCBPO00560 AC025033.1-201ENST00000463883 194 ntBASIC1.8□□□□□ -2.12
SDCBPO00560 MRPL42P6-201ENST00000486397 371 ntBASIC1.8□□□□□ -2.12
SDCBPO00560 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.8□□□□□ -2.12
SDCBPO00560 OR5BM1P-201ENST00000512021 366 ntBASIC1.8□□□□□ -2.12
SDCBPO00560 RNA5SP200-201ENST00000516360 103 ntBASIC1.8□□□□□ -2.12
SDCBPO00560 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC1.8□□□□□ -2.12
SDCBPO00560 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.8□□□□□ -2.12
SDCBPO00560 AP003122.3-201ENST00000526316 255 ntBASIC1.8□□□□□ -2.12
SDCBPO00560 CASP1P1-201ENST00000526345 212 ntBASIC1.8□□□□□ -2.12
SDCBPO00560 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SDCBPO00560 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SDCBPO00560 EEF1B2P4-201ENST00000551398 348 ntBASIC1.8□□□□□ -2.12
SDCBPO00560 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.8□□□□□ -2.12
SDCBPO00560 AC023824.3-201ENST00000569003 562 ntBASIC1.8□□□□□ -2.12
SDCBPO00560 MIR3609-201ENST00000582661 80 ntBASIC1.8□□□□□ -2.12
SDCBPO00560 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.8□□□□□ -2.12
SDCBPO00560 OR1M4P-201ENST00000589199 287 ntBASIC1.8□□□□□ -2.12
SDCBPO00560 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.8□□□□□ -2.12
SDCBPO00560 AC092954.1-201ENST00000609121 445 ntBASIC1.8□□□□□ -2.12
SDCBPO00560 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SDCBPO00560 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.8□□□□□ -2.12
SDCBPO00560 AL161629.2-201ENST00000615347 275 ntBASIC1.8□□□□□ -2.12
SDCBPO00560 MIR6873-201ENST00000622788 63 ntBASIC1.8□□□□□ -2.12
SDCBPO00560 AC027309.3-201ENST00000623419 351 ntBASIC1.8□□□□□ -2.12
SDCBPO00560 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC1.8□□□□□ -2.12
SDCBPO00560 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SDCBPO00560 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.8□□□□□ -2.12
SDCBPO00560 AC006020.1-201ENST00000420179 1854 ntBASIC1.8□□□□□ -2.12
SDCBPO00560 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
SDCBPO00560 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.79□□□□□ -2.12
SDCBPO00560 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.79□□□□□ -2.12
SDCBPO00560 RNU1-73P-201ENST00000383971 164 ntBASIC1.79□□□□□ -2.12
SDCBPO00560 RNU6-1072P-201ENST00000384703 107 ntBASIC1.79□□□□□ -2.12
SDCBPO00560 RNU6-443P-201ENST00000384780 107 ntBASIC1.79□□□□□ -2.12
SDCBPO00560 MIR634-201ENST00000385208 97 ntBASIC1.79□□□□□ -2.12
SDCBPO00560 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SDCBPO00560 SNORA48.3-201ENST00000391081 134 ntBASIC1.79□□□□□ -2.12
SDCBPO00560 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.79□□□□□ -2.12
SDCBPO00560 RNU4-53P-201ENST00000410828 140 ntBASIC1.79□□□□□ -2.12
SDCBPO00560 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.79□□□□□ -2.12
SDCBPO00560 OR51A3P-201ENST00000413596 924 ntBASIC1.79□□□□□ -2.12
SDCBPO00560 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.79□□□□□ -2.12
SDCBPO00560 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.79□□□□□ -2.12
SDCBPO00560 AC093422.3-201ENST00000428506 305 ntBASIC1.79□□□□□ -2.12
SDCBPO00560 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.79□□□□□ -2.12
SDCBPO00560 NDUFB4P6-201ENST00000436819 366 ntBASIC1.79□□□□□ -2.12
SDCBPO00560 SDR42E1P3-201ENST00000438345 502 ntBASIC1.79□□□□□ -2.12
SDCBPO00560 HSPE1P6-201ENST00000479457 291 ntBASIC1.79□□□□□ -2.12
SDCBPO00560 RPS27P26-201ENST00000494583 239 ntBASIC1.79□□□□□ -2.12
SDCBPO00560 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.79□□□□□ -2.12
SDCBPO00560 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SDCBPO00560 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.79□□□□□ -2.12
SDCBPO00560 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms