Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 XGY1-201ENST00000381172 446 ntBASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 SMC4P1-201ENST00000414479 527 ntBASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 AL158823.1-201ENST00000418441 478 ntBASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 AC005326.1-201ENST00000429197 123 ntBASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 Z80107.1-201ENST00000436830 412 ntBASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 AL591719.1-201ENST00000444669 744 ntBASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 AL133547.1-201ENST00000448546 220 ntBASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 RNU1-98P-201ENST00000458992 160 ntBASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 RPL21P99-201ENST00000480369 423 ntBASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 RPL23AP63-201ENST00000498752 471 ntBASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 AC234781.5-201ENST00000508429 271 ntBASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 HIGD1AP13-201ENST00000509878 289 ntBASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 FABP5P6-201ENST00000510588 409 ntBASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 AC010374.2-201ENST00000512933 535 ntBASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 RNA5SP320-201ENST00000516263 124 ntBASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 AC243960.4-201ENST00000600532 288 ntBASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 AL078605.1-201ENST00000603529 500 ntBASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 AC093838.1-201ENST00000613014 469 ntBASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 AL773524.1-201ENST00000614065 229 ntBASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 AC009159.1-201ENST00000618386 642 ntBASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 HSPA8P4-201ENST00000511877 1920 ntBASIC1.05□□□□□ -2.24
CHKB-CPT1BH3BT56 RNU1-91P-201ENST00000364746 163 ntBASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 RNU6-730P-201ENST00000383954 104 ntBASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 MIR221-201ENST00000385135 110 ntBASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 MIR1303-201ENST00000408625 86 ntBASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 VN1R51P-201ENST00000411675 945 ntBASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 AL024507.1-201ENST00000412741 274 ntBASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 RPS7P9-201ENST00000414704 586 ntBASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 AC099548.1-201ENST00000421443 426 ntBASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 RPS3AP44-201ENST00000425466 790 ntBASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 AC005300.1-201ENST00000428401 373 ntBASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 MICF-203ENST00000432679 129 ntBASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 USP9YP15-201ENST00000442391 422 ntBASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 RPL23AP6-201ENST00000446637 472 ntBASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 AL589880.1-201ENST00000448271 287 ntBASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 AL627224.1-201ENST00000448334 444 ntBASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 AC027575.1-201ENST00000481064 460 ntBASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 AC021087.2-201ENST00000504656 1203 ntBASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 SUMO2P6-201ENST00000505273 288 ntBASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 HMGB1P1-201ENST00000522557 636 ntBASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 ERP27-202ENST00000540097 993 ntTSL 2 BASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 AL442163.2-201ENST00000553912 710 ntBASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 MIR5010-201ENST00000582846 120 ntBASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 ELOCP35-201ENST00000604289 336 ntBASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 AC124312.4-201ENST00000605533 310 ntBASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 AL023583.1-201ENST00000607518 1143 ntBASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 AC007038.2-201ENST00000608095 740 ntBASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 AC073968.1-201ENST00000618594 637 ntBASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 OR8B1P-202ENST00000641132 1178 ntBASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 MTCO1P4-201ENST00000520516 1409 ntBASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CHKB-CPT1BH3BT56 AC016717.2-201ENST00000609089 5141 ntBASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 RN7SKP227-201ENST00000364445 330 ntBASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 MIR200C-201ENST00000384980 68 ntBASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 AL589655.1-201ENST00000405398 482 ntBASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 SNORA11.4-201ENST00000408823 129 ntBASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 RN7SKP158-201ENST00000410453 326 ntBASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 RN7SKP263-201ENST00000411194 309 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms