Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 RNU6-432P-201ENST00000384196 109 ntBASIC2.23□□□□□ -2.05
SMKR1H3BMG3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
SMKR1H3BMG3 AL513475.1-201ENST00000406602 315 ntBASIC2.23□□□□□ -2.05
SMKR1H3BMG3 AC063979.1-201ENST00000415539 377 ntBASIC2.23□□□□□ -2.05
SMKR1H3BMG3 HSFY4P-201ENST00000415994 1181 ntBASIC2.23□□□□□ -2.05
SMKR1H3BMG3 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.23□□□□□ -2.05
SMKR1H3BMG3 YWHAZP7-201ENST00000436906 631 ntBASIC2.23□□□□□ -2.05
SMKR1H3BMG3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.23□□□□□ -2.05
SMKR1H3BMG3 RPS15AP7-201ENST00000439294 405 ntBASIC2.23□□□□□ -2.05
SMKR1H3BMG3 EEF1E1P1-201ENST00000446998 430 ntBASIC2.23□□□□□ -2.05
SMKR1H3BMG3 PAXBP1P1-201ENST00000449315 447 ntBASIC2.23□□□□□ -2.05
SMKR1H3BMG3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.23□□□□□ -2.05
SMKR1H3BMG3 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.23□□□□□ -2.05
SMKR1H3BMG3 MRPS17P3-201ENST00000465453 385 ntBASIC2.23□□□□□ -2.05
SMKR1H3BMG3 ACTR3P3-201ENST00000480448 893 ntBASIC2.23□□□□□ -2.05
SMKR1H3BMG3 AP001025.2-201ENST00000490908 477 ntBASIC2.23□□□□□ -2.05
SMKR1H3BMG3 AC135721.1-201ENST00000497954 479 ntBASIC2.23□□□□□ -2.05
SMKR1H3BMG3 PRELID3BP6-201ENST00000503839 571 ntBASIC2.23□□□□□ -2.05
SMKR1H3BMG3 CDC42P4-201ENST00000510507 563 ntBASIC2.23□□□□□ -2.05
SMKR1H3BMG3 AC116353.3-201ENST00000511215 249 ntBASIC2.23□□□□□ -2.05
SMKR1H3BMG3 NPM1P41-201ENST00000512920 831 ntBASIC2.23□□□□□ -2.05
SMKR1H3BMG3 MIR2116-201ENST00000517221 80 ntBASIC2.23□□□□□ -2.05
SMKR1H3BMG3 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.23□□□□□ -2.05
SMKR1H3BMG3 AC007536.1-201ENST00000533382 349 ntBASIC2.23□□□□□ -2.05
SMKR1H3BMG3 AL133271.1-201ENST00000538229 291 ntBASIC2.23□□□□□ -2.05
SMKR1H3BMG3 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.23□□□□□ -2.05
SMKR1H3BMG3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.23□□□□□ -2.05
SMKR1H3BMG3 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.23□□□□□ -2.05
SMKR1H3BMG3 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.23□□□□□ -2.05
SMKR1H3BMG3 HMGN2P15-201ENST00000585707 270 ntBASIC2.23□□□□□ -2.05
SMKR1H3BMG3 AC011471.1-201ENST00000585766 187 ntBASIC2.23□□□□□ -2.05
SMKR1H3BMG3 AP001269.3-201ENST00000588718 329 ntBASIC2.23□□□□□ -2.05
SMKR1H3BMG3 OR1M4P-201ENST00000589199 287 ntBASIC2.23□□□□□ -2.05
SMKR1H3BMG3 AC136601.2-201ENST00000604356 474 ntBASIC2.23□□□□□ -2.05
SMKR1H3BMG3 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.23□□□□□ -2.05
SMKR1H3BMG3 AC100793.4-201ENST00000613683 429 ntBASIC2.23□□□□□ -2.05
SMKR1H3BMG3 SDR42E1P2-201ENST00000614861 481 ntBASIC2.23□□□□□ -2.05
SMKR1H3BMG3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.23□□□□□ -2.05
SMKR1H3BMG3 PABPC1P9-201ENST00000426076 1612 ntBASIC2.23□□□□□ -2.05
SMKR1H3BMG3 AC099786.3-201ENST00000565735 1410 ntBASIC2.23□□□□□ -2.05
SMKR1H3BMG3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
SMKR1H3BMG3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.23□□□□□ -2.05
SMKR1H3BMG3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SMKR1H3BMG3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.23□□□□□ -2.05
SMKR1H3BMG3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SMKR1H3BMG3 CCT4P2-201ENST00000233836 1548 ntBASIC2.22□□□□□ -2.05
SMKR1H3BMG3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SMKR1H3BMG3 ASNSP3-201ENST00000451989 1306 ntBASIC2.22□□□□□ -2.05
SMKR1H3BMG3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SMKR1H3BMG3 RPL9P7-201ENST00000330965 580 ntBASIC2.22□□□□□ -2.05
SMKR1H3BMG3 SNORD116.1-201ENST00000365628 92 ntBASIC2.22□□□□□ -2.05
SMKR1H3BMG3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
SMKR1H3BMG3 SNORA26.7-201ENST00000391288 122 ntBASIC2.22□□□□□ -2.05
SMKR1H3BMG3 AL122016.1-201ENST00000403365 367 ntBASIC2.22□□□□□ -2.05
SMKR1H3BMG3 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.22□□□□□ -2.05
SMKR1H3BMG3 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.22□□□□□ -2.05
SMKR1H3BMG3 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.22□□□□□ -2.05
SMKR1H3BMG3 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.22□□□□□ -2.05
SMKR1H3BMG3 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.22□□□□□ -2.05
SMKR1H3BMG3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.22□□□□□ -2.05
SMKR1H3BMG3 RPS25P9-201ENST00000435591 252 ntBASIC2.22□□□□□ -2.05
SMKR1H3BMG3 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.22□□□□□ -2.05
SMKR1H3BMG3 AL513043.1-201ENST00000439124 535 ntBASIC2.22□□□□□ -2.05
SMKR1H3BMG3 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.22□□□□□ -2.05
SMKR1H3BMG3 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.22□□□□□ -2.05
SMKR1H3BMG3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.22□□□□□ -2.05
SMKR1H3BMG3 AC021146.8-201ENST00000507455 733 ntBASIC2.22□□□□□ -2.05
SMKR1H3BMG3 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.22□□□□□ -2.05
SMKR1H3BMG3 AC034159.1-201ENST00000513885 583 ntBASIC2.22□□□□□ -2.05
SMKR1H3BMG3 RNA5SP76-201ENST00000516277 87 ntBASIC2.22□□□□□ -2.05
SMKR1H3BMG3 RPPH1-2P-201ENST00000516688 293 ntBASIC2.22□□□□□ -2.05
SMKR1H3BMG3 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.22□□□□□ -2.05
SMKR1H3BMG3 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC2.22□□□□□ -2.05
SMKR1H3BMG3 AC022634.1-201ENST00000520765 532 ntBASIC2.22□□□□□ -2.05
SMKR1H3BMG3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.22□□□□□ -2.05
SMKR1H3BMG3 AC090616.3-201ENST00000582184 217 ntBASIC2.22□□□□□ -2.05
SMKR1H3BMG3 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.22□□□□□ -2.05
SMKR1H3BMG3 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.22□□□□□ -2.05
SMKR1H3BMG3 TPMTP1-201ENST00000592307 737 ntBASIC2.22□□□□□ -2.05
SMKR1H3BMG3 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.22□□□□□ -2.05
SMKR1H3BMG3 PRELID3BP8-201ENST00000604148 295 ntBASIC2.22□□□□□ -2.05
SMKR1H3BMG3 AL158050.2-201ENST00000605336 568 ntBASIC2.22□□□□□ -2.05
SMKR1H3BMG3 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.22□□□□□ -2.05
SMKR1H3BMG3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.22□□□□□ -2.05
SMKR1H3BMG3 MIR6820-201ENST00000611508 62 ntBASIC2.22□□□□□ -2.05
SMKR1H3BMG3 AL020991.1-201ENST00000612314 373 ntBASIC2.22□□□□□ -2.05
SMKR1H3BMG3 MIR6730-201ENST00000622213 67 ntBASIC2.22□□□□□ -2.05
SMKR1H3BMG3 AC099506.2-201ENST00000623074 221 ntBASIC2.22□□□□□ -2.05
SMKR1H3BMG3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SMKR1H3BMG3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.22□□□□□ -2.05
SMKR1H3BMG3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
SMKR1H3BMG3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.22□□□□□ -2.05
SMKR1H3BMG3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.22□□□□□ -2.05
SMKR1H3BMG3 AC009902.3-201ENST00000606235 2172 ntBASIC2.22□□□□□ -2.05
SMKR1H3BMG3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
SMKR1H3BMG3 AC009487.2-201ENST00000420969 6821 ntBASIC2.22□□□□□ -2.05
SMKR1H3BMG3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
SMKR1H3BMG3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.21□□□□□ -2.06
SMKR1H3BMG3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.21□□□□□ -2.06
SMKR1H3BMG3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms