Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.23□□□□□ -1.57
RNF223E7ERA6 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RNF223E7ERA6 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF223E7ERA6 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.23□□□□□ -1.57
RNF223E7ERA6 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RNF223E7ERA6 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF223E7ERA6 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.23□□□□□ -1.57
RNF223E7ERA6 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF223E7ERA6 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF223E7ERA6 SNORA21-201ENST00000362423 132 ntBASIC5.23□□□□□ -1.57
RNF223E7ERA6 Y_RNA.393-201ENST00000383936 102 ntBASIC5.23□□□□□ -1.57
RNF223E7ERA6 Y_RNA.498-201ENST00000384460 102 ntBASIC5.23□□□□□ -1.57
RNF223E7ERA6 MIR487A-201ENST00000385009 80 ntBASIC5.23□□□□□ -1.57
RNF223E7ERA6 MIR15B-201ENST00000385045 98 ntBASIC5.23□□□□□ -1.57
RNF223E7ERA6 MIR548A3-201ENST00000385297 97 ntBASIC5.23□□□□□ -1.57
RNF223E7ERA6 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RNF223E7ERA6 U3.19-201ENST00000390893 196 ntBASIC5.23□□□□□ -1.57
RNF223E7ERA6 MIR888-201ENST00000401186 77 ntBASIC5.23□□□□□ -1.57
RNF223E7ERA6 AL358075.3-201ENST00000426289 226 ntBASIC5.23□□□□□ -1.57
RNF223E7ERA6 AC007560.1-201ENST00000426912 237 ntBASIC5.23□□□□□ -1.57
RNF223E7ERA6 RPS27AP12-201ENST00000429552 465 ntBASIC5.23□□□□□ -1.57
RNF223E7ERA6 RPL12P46-201ENST00000436610 195 ntBASIC5.23□□□□□ -1.57
RNF223E7ERA6 RPS27P1-201ENST00000450552 247 ntBASIC5.23□□□□□ -1.57
RNF223E7ERA6 snoU109.2-201ENST00000459316 135 ntBASIC5.23□□□□□ -1.57
RNF223E7ERA6 RN7SL561P-201ENST00000488553 281 ntBASIC5.23□□□□□ -1.57
RNF223E7ERA6 RN7SL629P-201ENST00000489622 285 ntBASIC5.23□□□□□ -1.57
RNF223E7ERA6 AC139453.3-201ENST00000493276 369 ntBASIC5.23□□□□□ -1.57
RNF223E7ERA6 RNA5SP434-201ENST00000516647 121 ntBASIC5.23□□□□□ -1.57
RNF223E7ERA6 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.23□□□□□ -1.57
RNF223E7ERA6 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.23□□□□□ -1.57
RNF223E7ERA6 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF223E7ERA6 AL589674.2-201ENST00000604304 337 ntBASIC5.23□□□□□ -1.57
RNF223E7ERA6 AL391903.3-201ENST00000612158 163 ntBASIC5.23□□□□□ -1.57
RNF223E7ERA6 AL353748.2-201ENST00000622148 471 ntBASIC5.23□□□□□ -1.57
RNF223E7ERA6 AC106754.2-201ENST00000623006 233 ntBASIC5.23□□□□□ -1.57
RNF223E7ERA6 SCARNA4-202ENST00000625402 129 ntBASIC5.23□□□□□ -1.57
RNF223E7ERA6 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.23□□□□□ -1.57
RNF223E7ERA6 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF223E7ERA6 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RNF223E7ERA6 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.23□□□□□ -1.57
RNF223E7ERA6 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RNF223E7ERA6 AP005435.3-201ENST00000531260 3198 ntBASIC5.23□□□□□ -1.57
RNF223E7ERA6 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF223E7ERA6 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC5.23□□□□□ -1.57
RNF223E7ERA6 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
RNF223E7ERA6 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF223E7ERA6 SMG1P7-201ENST00000565246 2704 ntBASIC5.23□□□□□ -1.57
RNF223E7ERA6 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RNF223E7ERA6 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RNF223E7ERA6 FAM91A3P-201ENST00000456826 2544 ntBASIC5.23□□□□□ -1.57
RNF223E7ERA6 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.23□□□□□ -1.57
RNF223E7ERA6 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
RNF223E7ERA6 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RNF223E7ERA6 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RNF223E7ERA6 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
RNF223E7ERA6 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC5.22□□□□□ -1.57
RNF223E7ERA6 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RNF223E7ERA6 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RNF223E7ERA6 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RNF223E7ERA6 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RNF223E7ERA6 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RNF223E7ERA6 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC5.22□□□□□ -1.57
RNF223E7ERA6 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC5.22□□□□□ -1.57
RNF223E7ERA6 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
RNF223E7ERA6 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RNF223E7ERA6 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RNF223E7ERA6 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC5.22□□□□□ -1.57
RNF223E7ERA6 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
RNF223E7ERA6 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RNF223E7ERA6 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.22□□□□□ -1.57
RNF223E7ERA6 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.22□□□□□ -1.57
RNF223E7ERA6 RNU6-1249P-201ENST00000363237 111 ntBASIC5.22□□□□□ -1.57
RNF223E7ERA6 RNU6-527P-201ENST00000363425 104 ntBASIC5.22□□□□□ -1.57
RNF223E7ERA6 RNU6-801P-201ENST00000364087 105 ntBASIC5.22□□□□□ -1.57
RNF223E7ERA6 Y_RNA.293-201ENST00000364908 93 ntBASIC5.22□□□□□ -1.57
RNF223E7ERA6 Y_RNA.329-201ENST00000365209 107 ntBASIC5.22□□□□□ -1.57
RNF223E7ERA6 RNU6-1310P-201ENST00000384153 107 ntBASIC5.22□□□□□ -1.57
RNF223E7ERA6 Y_RNA.521-201ENST00000384560 114 ntBASIC5.22□□□□□ -1.57
RNF223E7ERA6 SNORA75.5-201ENST00000391291 81 ntBASIC5.22□□□□□ -1.57
RNF223E7ERA6 RNA5SP156-201ENST00000410250 110 ntBASIC5.22□□□□□ -1.57
RNF223E7ERA6 AC009963.1-201ENST00000417265 157 ntBASIC5.22□□□□□ -1.57
RNF223E7ERA6 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.22□□□□□ -1.57
RNF223E7ERA6 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.22□□□□□ -1.57
RNF223E7ERA6 HSPE1P6-201ENST00000479457 291 ntBASIC5.22□□□□□ -1.57
RNF223E7ERA6 RPL31P13-201ENST00000484151 370 ntBASIC5.22□□□□□ -1.57
RNF223E7ERA6 AC146944.2-203ENST00000502493 354 ntBASIC5.22□□□□□ -1.57
RNF223E7ERA6 AC083906.1-201ENST00000509298 406 ntBASIC5.22□□□□□ -1.57
RNF223E7ERA6 AC091874.1-201ENST00000511402 339 ntBASIC5.22□□□□□ -1.57
RNF223E7ERA6 AC139495.1-202ENST00000513164 354 ntBASIC5.22□□□□□ -1.57
RNF223E7ERA6 RNU2-60P-201ENST00000517290 128 ntBASIC5.22□□□□□ -1.57
RNF223E7ERA6 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.22□□□□□ -1.57
RNF223E7ERA6 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.22□□□□□ -1.57
RNF223E7ERA6 SNORD95-201ENST00000579879 68 ntBASIC5.22□□□□□ -1.57
RNF223E7ERA6 AC074141.1-201ENST00000588129 2995 ntBASIC5.22□□□□□ -1.57
RNF223E7ERA6 AC005255.1-201ENST00000593748 216 ntBASIC5.22□□□□□ -1.57
RNF223E7ERA6 AL391261.4-201ENST00000616012 481 ntBASIC5.22□□□□□ -1.57
RNF223E7ERA6 UGP2-230ENST00000626380 276 ntTSL 5 BASIC5.22□□□□□ -1.57
RNF223E7ERA6 MIR4496-201ENST00000635896 61 ntBASIC5.22□□□□□ -1.57
RNF223E7ERA6 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
RNF223E7ERA6 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms