Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
CPSF4LA6NMK7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
CPSF4LA6NMK7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
CPSF4LA6NMK7 AC099654.7-201ENST00000635788 2127 ntBASIC1.3□□□□□ -2.2
CPSF4LA6NMK7 AL359893.1-201ENST00000447628 1580 ntBASIC1.3□□□□□ -2.2
CPSF4LA6NMK7 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CPSF4LA6NMK7 RNU6-174P-201ENST00000410406 106 ntBASIC1.29□□□□□ -2.2
CPSF4LA6NMK7 RNU4-65P-201ENST00000410473 140 ntBASIC1.29□□□□□ -2.2
CPSF4LA6NMK7 AC096533.1-201ENST00000411645 353 ntBASIC1.29□□□□□ -2.2
CPSF4LA6NMK7 AC092745.2-202ENST00000411880 369 ntBASIC1.29□□□□□ -2.2
CPSF4LA6NMK7 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CPSF4LA6NMK7 ARL5AP2-201ENST00000444698 533 ntBASIC1.29□□□□□ -2.2
CPSF4LA6NMK7 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.29□□□□□ -2.2
CPSF4LA6NMK7 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.29□□□□□ -2.2
CPSF4LA6NMK7 AC025768.1-201ENST00000510057 267 ntBASIC1.29□□□□□ -2.2
CPSF4LA6NMK7 RNA5SP468-201ENST00000516782 93 ntBASIC1.29□□□□□ -2.2
CPSF4LA6NMK7 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC1.29□□□□□ -2.2
CPSF4LA6NMK7 AP004607.1-201ENST00000524456 203 ntBASIC1.29□□□□□ -2.2
CPSF4LA6NMK7 AC019227.1-201ENST00000526902 510 ntBASIC1.29□□□□□ -2.2
CPSF4LA6NMK7 AC067805.1-201ENST00000559344 470 ntBASIC1.29□□□□□ -2.2
CPSF4LA6NMK7 AC245036.5-201ENST00000596330 847 ntBASIC1.29□□□□□ -2.2
CPSF4LA6NMK7 NUTF2P8-201ENST00000604593 363 ntBASIC1.29□□□□□ -2.2
CPSF4LA6NMK7 AL110115.1-201ENST00000614396 364 ntBASIC1.29□□□□□ -2.2
CPSF4LA6NMK7 uc_338.9-201ENST00000617424 182 ntBASIC1.29□□□□□ -2.2
CPSF4LA6NMK7 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.29□□□□□ -2.2
CPSF4LA6NMK7 AC116563.2-201ENST00000624751 535 ntBASIC1.29□□□□□ -2.2
CPSF4LA6NMK7 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
CPSF4LA6NMK7 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
CPSF4LA6NMK7 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
CPSF4LA6NMK7 RNU6-50P-201ENST00000362356 103 ntBASIC1.28□□□□□ -2.2
CPSF4LA6NMK7 RNU6-76P-201ENST00000384060 104 ntBASIC1.28□□□□□ -2.2
CPSF4LA6NMK7 PTGES3P2-201ENST00000407942 482 ntBASIC1.28□□□□□ -2.2
CPSF4LA6NMK7 RNU4-72P-201ENST00000410754 173 ntBASIC1.28□□□□□ -2.2
CPSF4LA6NMK7 SPA17P1-201ENST00000416656 452 ntBASIC1.28□□□□□ -2.2
CPSF4LA6NMK7 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.28□□□□□ -2.2
CPSF4LA6NMK7 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.28□□□□□ -2.2
CPSF4LA6NMK7 SNRPEP4-201ENST00000435815 279 ntBASIC1.28□□□□□ -2.2
CPSF4LA6NMK7 AC090774.1-201ENST00000435925 246 ntBASIC1.28□□□□□ -2.2
CPSF4LA6NMK7 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.28□□□□□ -2.2
CPSF4LA6NMK7 IFNA11P-201ENST00000446352 526 ntBASIC1.28□□□□□ -2.2
CPSF4LA6NMK7 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.28□□□□□ -2.2
CPSF4LA6NMK7 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CPSF4LA6NMK7 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.28□□□□□ -2.2
CPSF4LA6NMK7 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.28□□□□□ -2.2
CPSF4LA6NMK7 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.28□□□□□ -2.2
CPSF4LA6NMK7 AC022690.1-201ENST00000526681 550 ntBASIC1.28□□□□□ -2.2
CPSF4LA6NMK7 AC027807.1-201ENST00000559921 996 ntBASIC1.28□□□□□ -2.2
CPSF4LA6NMK7 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.28□□□□□ -2.2
CPSF4LA6NMK7 AC009127.3-201ENST00000570531 403 ntBASIC1.28□□□□□ -2.2
CPSF4LA6NMK7 AC090616.3-201ENST00000582184 217 ntBASIC1.28□□□□□ -2.2
CPSF4LA6NMK7 AL158827.2-201ENST00000602494 330 ntBASIC1.28□□□□□ -2.2
CPSF4LA6NMK7 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.2
CPSF4LA6NMK7 AL353748.2-201ENST00000622148 471 ntBASIC1.28□□□□□ -2.2
CPSF4LA6NMK7 AL691447.3-201ENST00000635020 330 ntBASIC1.28□□□□□ -2.2
CPSF4LA6NMK7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.28□□□□□ -2.2
CPSF4LA6NMK7 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.2
CPSF4LA6NMK7 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
CPSF4LA6NMK7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
CPSF4LA6NMK7 AC022336.2-201ENST00000568966 2538 ntBASIC1.27□□□□□ -2.21
CPSF4LA6NMK7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CPSF4LA6NMK7 AC007342.9-201ENST00000623877 1385 ntBASIC1.27□□□□□ -2.21
CPSF4LA6NMK7 U8.1-201ENST00000362843 134 ntBASIC1.27□□□□□ -2.21
CPSF4LA6NMK7 MIR524-201ENST00000385242 87 ntBASIC1.27□□□□□ -2.21
CPSF4LA6NMK7 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CPSF4LA6NMK7 AC074117.2-201ENST00000417130 397 ntBASIC1.27□□□□□ -2.21
CPSF4LA6NMK7 AC096632.1-201ENST00000427395 310 ntBASIC1.27□□□□□ -2.21
CPSF4LA6NMK7 TRIM60P3Y-201ENST00000432201 673 ntBASIC1.27□□□□□ -2.21
CPSF4LA6NMK7 HMGB1P18-201ENST00000438801 619 ntBASIC1.27□□□□□ -2.21
CPSF4LA6NMK7 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CPSF4LA6NMK7 AC117522.2-201ENST00000510049 657 ntBASIC1.27□□□□□ -2.21
CPSF4LA6NMK7 AC110792.2-201ENST00000510278 224 ntBASIC1.27□□□□□ -2.21
CPSF4LA6NMK7 RAC1P5-201ENST00000512182 576 ntBASIC1.27□□□□□ -2.21
CPSF4LA6NMK7 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.27□□□□□ -2.21
CPSF4LA6NMK7 HSPE1P3-201ENST00000559254 309 ntBASIC1.27□□□□□ -2.21
CPSF4LA6NMK7 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.27□□□□□ -2.21
CPSF4LA6NMK7 AC009220.3-201ENST00000604318 586 ntBASIC1.27□□□□□ -2.21
CPSF4LA6NMK7 AL355816.1-201ENST00000607951 118 ntBASIC1.27□□□□□ -2.21
CPSF4LA6NMK7 AC245884.12-201ENST00000615364 59 ntBASIC1.27□□□□□ -2.21
CPSF4LA6NMK7 AC139769.3-201ENST00000618383 175 ntBASIC1.27□□□□□ -2.21
CPSF4LA6NMK7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.27□□□□□ -2.21
CPSF4LA6NMK7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CPSF4LA6NMK7 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CPSF4LA6NMK7 U8.3-201ENST00000363321 132 ntBASIC1.26□□□□□ -2.21
CPSF4LA6NMK7 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CPSF4LA6NMK7 RNU6-1072P-201ENST00000384703 107 ntBASIC1.26□□□□□ -2.21
CPSF4LA6NMK7 RNU6-443P-201ENST00000384780 107 ntBASIC1.26□□□□□ -2.21
CPSF4LA6NMK7 MT-TP-201ENST00000387461 68 ntBASIC1.26□□□□□ -2.21
CPSF4LA6NMK7 AP002784.2-201ENST00000397300 549 ntBASIC1.26□□□□□ -2.21
CPSF4LA6NMK7 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CPSF4LA6NMK7 MIR1261-201ENST00000408659 82 ntBASIC1.26□□□□□ -2.21
CPSF4LA6NMK7 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.26□□□□□ -2.21
CPSF4LA6NMK7 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.26□□□□□ -2.21
CPSF4LA6NMK7 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.26□□□□□ -2.21
CPSF4LA6NMK7 GPM6BP3-201ENST00000442797 145 ntBASIC1.26□□□□□ -2.21
CPSF4LA6NMK7 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.26□□□□□ -2.21
CPSF4LA6NMK7 AC010095.1-201ENST00000443543 144 ntBASIC1.26□□□□□ -2.21
CPSF4LA6NMK7 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.26□□□□□ -2.21
CPSF4LA6NMK7 AP002345.1-201ENST00000456493 928 ntBASIC1.26□□□□□ -2.21
CPSF4LA6NMK7 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.26□□□□□ -2.21
CPSF4LA6NMK7 AC113155.1-201ENST00000511141 769 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms