Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SYCE3A1L190 TAF9BP1-201ENST00000396646 746 ntBASIC3.2□□□□□ -1.9
SYCE3A1L190 AL512633.1-201ENST00000399931 655 ntBASIC3.2□□□□□ -1.9
SYCE3A1L190 MTND4P13-201ENST00000402078 1023 ntBASIC3.2□□□□□ -1.9
SYCE3A1L190 RNU4-47P-201ENST00000410876 114 ntBASIC3.2□□□□□ -1.9
SYCE3A1L190 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.2□□□□□ -1.9
SYCE3A1L190 AC005300.1-201ENST00000428401 373 ntBASIC3.2□□□□□ -1.9
SYCE3A1L190 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.2□□□□□ -1.9
SYCE3A1L190 AC092573.2-201ENST00000434546 243 ntBASIC3.2□□□□□ -1.9
SYCE3A1L190 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.2□□□□□ -1.9
SYCE3A1L190 AC091862.1-201ENST00000438016 1100 ntBASIC3.2□□□□□ -1.9
SYCE3A1L190 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.2□□□□□ -1.9
SYCE3A1L190 AC010099.1-201ENST00000455434 375 ntBASIC3.2□□□□□ -1.9
SYCE3A1L190 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.2□□□□□ -1.9
SYCE3A1L190 AC005410.1-202ENST00000460347 485 ntBASIC3.2□□□□□ -1.9
SYCE3A1L190 MTND1P16-201ENST00000465177 898 ntBASIC3.2□□□□□ -1.9
SYCE3A1L190 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.2□□□□□ -1.9
SYCE3A1L190 RNU6-150P-201ENST00000516237 95 ntBASIC3.2□□□□□ -1.9
SYCE3A1L190 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SYCE3A1L190 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.2□□□□□ -1.9
SYCE3A1L190 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.2□□□□□ -1.9
SYCE3A1L190 MIR4509-3-201ENST00000578671 94 ntBASIC3.2□□□□□ -1.9
SYCE3A1L190 MIR3609-201ENST00000582661 80 ntBASIC3.2□□□□□ -1.9
SYCE3A1L190 MIR3605-201ENST00000583214 100 ntBASIC3.2□□□□□ -1.9
SYCE3A1L190 MIR4509-2-201ENST00000583920 94 ntBASIC3.2□□□□□ -1.9
SYCE3A1L190 AL606834.2-201ENST00000602954 668 ntBASIC3.2□□□□□ -1.9
SYCE3A1L190 BBIP1P1-201ENST00000602999 279 ntBASIC3.2□□□□□ -1.9
SYCE3A1L190 AC068313.1-201ENST00000604028 1008 ntBASIC3.2□□□□□ -1.9
SYCE3A1L190 AC004067.1-201ENST00000608733 700 ntBASIC3.2□□□□□ -1.9
SYCE3A1L190 MIR4509-1-201ENST00000618224 94 ntBASIC3.2□□□□□ -1.9
SYCE3A1L190 AC006386.1-201ENST00000619436 415 ntBASIC3.2□□□□□ -1.9
SYCE3A1L190 CR381653.2-201ENST00000624041 768 ntBASIC3.2□□□□□ -1.9
SYCE3A1L190 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.2□□□□□ -1.9
SYCE3A1L190 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
SYCE3A1L190 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
SYCE3A1L190 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.2□□□□□ -1.9
SYCE3A1L190 AC005832.2-201ENST00000538921 1430 ntBASIC3.19□□□□□ -1.9
SYCE3A1L190 MTCO1P9-201ENST00000505577 1534 ntBASIC3.19□□□□□ -1.9
SYCE3A1L190 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SYCE3A1L190 AC009487.2-201ENST00000420969 6821 ntBASIC3.19□□□□□ -1.9
SYCE3A1L190 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SYCE3A1L190 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SYCE3A1L190 RNU5A-1-201ENST00000362698 116 ntBASIC3.19□□□□□ -1.9
SYCE3A1L190 RNU6-799P-201ENST00000363567 107 ntBASIC3.19□□□□□ -1.9
SYCE3A1L190 RNU4-68P-201ENST00000364314 141 ntBASIC3.19□□□□□ -1.9
SYCE3A1L190 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.19□□□□□ -1.9
SYCE3A1L190 SNORA36C-201ENST00000384289 132 ntBASIC3.19□□□□□ -1.9
SYCE3A1L190 Y_RNA.465-201ENST00000384293 102 ntBASIC3.19□□□□□ -1.9
SYCE3A1L190 RN7SKP220-201ENST00000410611 288 ntBASIC3.19□□□□□ -1.9
SYCE3A1L190 AL354692.1-201ENST00000423044 315 ntBASIC3.19□□□□□ -1.9
SYCE3A1L190 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.19□□□□□ -1.9
SYCE3A1L190 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.19□□□□□ -1.9
SYCE3A1L190 ST13P20-201ENST00000447996 1065 ntBASIC3.19□□□□□ -1.9
SYCE3A1L190 MTND1P31-201ENST00000449206 961 ntBASIC3.19□□□□□ -1.9
SYCE3A1L190 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.19□□□□□ -1.9
SYCE3A1L190 AP000705.1-201ENST00000454567 350 ntBASIC3.19□□□□□ -1.9
SYCE3A1L190 AC008571.1-201ENST00000467232 300 ntBASIC3.19□□□□□ -1.9
SYCE3A1L190 AC010374.2-201ENST00000512933 535 ntBASIC3.19□□□□□ -1.9
SYCE3A1L190 RNU6-826P-201ENST00000516827 104 ntBASIC3.19□□□□□ -1.9
SYCE3A1L190 AP003497.1-201ENST00000528472 562 ntBASIC3.19□□□□□ -1.9
SYCE3A1L190 AP000867.2-201ENST00000532468 320 ntBASIC3.19□□□□□ -1.9
SYCE3A1L190 HPRT1P3-201ENST00000539521 576 ntBASIC3.19□□□□□ -1.9
SYCE3A1L190 OR7K1P-201ENST00000546439 926 ntBASIC3.19□□□□□ -1.9
SYCE3A1L190 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.19□□□□□ -1.9
SYCE3A1L190 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.19□□□□□ -1.9
SYCE3A1L190 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.19□□□□□ -1.9
SYCE3A1L190 ACTR3BP3-201ENST00000565577 979 ntBASIC3.19□□□□□ -1.9
SYCE3A1L190 AL133507.1-201ENST00000605269 557 ntBASIC3.19□□□□□ -1.9
SYCE3A1L190 AC116618.1-201ENST00000634617 774 ntBASIC3.19□□□□□ -1.9
SYCE3A1L190 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.19□□□□□ -1.9
SYCE3A1L190 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SYCE3A1L190 AC099786.3-201ENST00000565735 1410 ntBASIC3.19□□□□□ -1.9
SYCE3A1L190 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.19□□□□□ -1.9
SYCE3A1L190 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SYCE3A1L190 AL161781.1-201ENST00000354277 403 ntBASIC3.18□□□□□ -1.9
SYCE3A1L190 MIR592-201ENST00000384959 97 ntBASIC3.18□□□□□ -1.9
SYCE3A1L190 MTCYBP38-201ENST00000417160 1123 ntBASIC3.18□□□□□ -1.9
SYCE3A1L190 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.18□□□□□ -1.9
SYCE3A1L190 ZYG11AP1-201ENST00000430329 837 ntBASIC3.18□□□□□ -1.9
SYCE3A1L190 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.18□□□□□ -1.9
SYCE3A1L190 OR4K11P-201ENST00000431829 904 ntBASIC3.18□□□□□ -1.9
SYCE3A1L190 TAAR7P-201ENST00000436141 242 ntBASIC3.18□□□□□ -1.9
SYCE3A1L190 RPL21P2-201ENST00000440049 481 ntBASIC3.18□□□□□ -1.9
SYCE3A1L190 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.18□□□□□ -1.9
SYCE3A1L190 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.18□□□□□ -1.9
SYCE3A1L190 SNRPGP6-201ENST00000451124 220 ntBASIC3.18□□□□□ -1.9
SYCE3A1L190 AC006483.1-201ENST00000487308 313 ntBASIC3.18□□□□□ -1.9
SYCE3A1L190 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.18□□□□□ -1.9
SYCE3A1L190 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.18□□□□□ -1.9
SYCE3A1L190 TBCAP3-201ENST00000512475 312 ntBASIC3.18□□□□□ -1.9
SYCE3A1L190 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.18□□□□□ -1.9
SYCE3A1L190 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.18□□□□□ -1.9
SYCE3A1L190 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.18□□□□□ -1.9
SYCE3A1L190 AC004486.1-201ENST00000546846 233 ntBASIC3.18□□□□□ -1.9
SYCE3A1L190 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.18□□□□□ -1.9
SYCE3A1L190 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.18□□□□□ -1.9
SYCE3A1L190 AL132857.1-201ENST00000555180 708 ntBASIC3.18□□□□□ -1.9
SYCE3A1L190 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.18□□□□□ -1.9
SYCE3A1L190 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.18□□□□□ -1.9
SYCE3A1L190 BNIP3P22-201ENST00000593399 556 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms