Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AL590233.1-201ENST00000430017 456 ntBASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 EZH2P1-201ENST00000431167 291 ntBASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 AC084290.1-201ENST00000434995 374 ntBASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 MTCYBP45-201ENST00000435243 565 ntBASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 Z80107.1-201ENST00000436830 412 ntBASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 SSXP4-201ENST00000451349 245 ntBASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 HMGB1P15-201ENST00000453854 435 ntBASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 RNU7-136P-201ENST00000458819 69 ntBASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 snoU109.4-201ENST00000458953 143 ntBASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 AC023424.2-201ENST00000493479 777 ntBASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 AC090453.1-201ENST00000495560 436 ntBASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 IGHV3-76-201ENST00000522465 295 ntBASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 AC010198.2-201ENST00000550612 259 ntBASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 CYCSP2-201ENST00000558168 301 ntBASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 AC090695.1-201ENST00000561269 1222 ntBASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 AL512347.1-201ENST00000566420 503 ntBASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 MIR4760-201ENST00000585040 80 ntBASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 AC007349.4-201ENST00000608114 532 ntBASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 AL390240.1-201ENST00000612950 384 ntBASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 AC109809.1-201ENST00000619665 545 ntBASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 AC090897.3-201ENST00000636973 1157 ntBASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 AP000776.1-201ENST00000530032 1663 ntBASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 AC093010.3-201ENST00000570269 15214 ntBASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 Y_RNA.311-201ENST00000365068 96 ntBASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 AL031679.1-201ENST00000400616 525 ntBASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 RPL7P30-201ENST00000420888 709 ntBASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 RPL23AP74-201ENST00000437246 471 ntBASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 Z82190.1-201ENST00000454534 490 ntBASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 RPL23AP31-201ENST00000456160 467 ntBASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 AC126389.1-201ENST00000477436 290 ntBASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 AC108729.1-201ENST00000487812 947 ntBASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 AC104090.1-201ENST00000506341 1171 ntBASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 AC006390.1-201ENST00000508068 283 ntBASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 AC010587.2-201ENST00000511727 448 ntBASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 OR5AK1P-201ENST00000524837 922 ntBASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 AC022662.1-201ENST00000580252 331 ntBASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 VN1R78P-201ENST00000597393 564 ntBASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 AC105148.1-201ENST00000604961 409 ntBASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 AC010738.1-201ENST00000604970 987 ntBASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 AC055876.5-201ENST00000605667 259 ntBASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 AC091046.2-201ENST00000620775 665 ntBASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 AC092628.2-201ENST00000622492 339 ntBASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.87□□□□□ -1.95
SMIM28A0A1B0GU29 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 AL022578.1-201ENST00000439330 1433 ntBASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 SNORA48.8-201ENST00000391324 134 ntBASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 AL512633.1-201ENST00000399931 655 ntBASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 HMGB1P17-201ENST00000403495 628 ntBASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 MIR1284-201ENST00000408337 120 ntBASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 TIMM9P2-201ENST00000419324 266 ntBASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 AL139421.1-201ENST00000423010 169 ntBASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 AC019178.2-201ENST00000423595 505 ntBASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 MTND4LP10-201ENST00000435146 291 ntBASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 CR769776.1-201ENST00000441254 787 ntBASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms