Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 AP001350.1-201ENST00000601906 1524 ntBASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 Y_RNA.231-201ENST00000364358 102 ntBASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 RNA5SP366-201ENST00000365454 123 ntBASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 RPL32P23-201ENST00000397237 405 ntBASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 RNU6-193P-201ENST00000410977 107 ntBASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 RPL7P46-201ENST00000425129 740 ntBASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 ERLEC1P1-201ENST00000433806 578 ntBASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 ELOCP23-201ENST00000452014 332 ntBASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 UQCRHP4-201ENST00000471686 272 ntBASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 RNU6-1073P-201ENST00000517182 106 ntBASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 MTND4P7-201ENST00000523876 130 ntBASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 AC093249.4-201ENST00000564755 259 ntBASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 AC104763.2-201ENST00000604179 382 ntBASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 RNU6-89P-201ENST00000606519 100 ntBASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 uc_338.34-201ENST00000617467 174 ntBASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 uc_338.11-201ENST00000619132 160 ntBASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 AC022140.2-201ENST00000623500 188 ntBASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 AC008785.1-201ENST00000624475 456 ntBASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 MIR3653-201ENST00000625572 110 ntBASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 AC008079.2-201ENST00000623543 20396 ntBASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CCDC163A0A0D9SF12 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 AC116667.1-201ENST00000604855 2072 ntBASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 RNU6-845P-201ENST00000362578 103 ntBASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 RNU4-20P-201ENST00000365601 151 ntBASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 RNU4-26P-201ENST00000410270 107 ntBASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 RN7SKP140-201ENST00000411196 284 ntBASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 RPL21P66-201ENST00000426566 466 ntBASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 HMGB1P27-201ENST00000431429 603 ntBASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 HSFY6P-201ENST00000445573 403 ntBASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 FGF7P3-201ENST00000454645 303 ntBASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 RPL9P32-201ENST00000464118 620 ntBASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 RPL21P8-201ENST00000465083 535 ntBASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 RPL21P126-201ENST00000470049 478 ntBASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 HSPE1P6-201ENST00000479457 291 ntBASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 SNORA31.9-201ENST00000516429 84 ntBASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 RN7SKP60-201ENST00000516985 239 ntBASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 RPL23AP53-201ENST00000521854 457 ntBASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 CYCSP29-201ENST00000533731 318 ntBASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 RAB11AP2-201ENST00000545905 639 ntBASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 AC005858.4-201ENST00000623191 700 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms