Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AC091179.1-201ENST00000461606 579 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 AC023424.2-201ENST00000493479 777 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 AC078918.1-201ENST00000498515 228 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 RNU6-150P-201ENST00000516237 95 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 Y_RNA.717-201ENST00000517106 92 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 SNORA31.20-201ENST00000517111 133 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 DUXAP1-201ENST00000556632 463 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 CYCSP2-201ENST00000558168 301 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 OR4K7P-201ENST00000580232 945 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 MIR4637-201ENST00000582405 84 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 ZNF861P-201ENST00000588126 639 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 AL133507.1-201ENST00000605269 557 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 AC069234.5-201ENST00000611056 416 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 AC025588.4-201ENST00000615802 908 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 AL355493.4-201ENST00000618530 292 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 AC109809.1-201ENST00000619665 545 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 C2orf27A-204ENST00000623058 969 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 AC068787.1-201ENST00000623908 691 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 AC092593.1-201ENST00000515413 1815 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 GDI2P1-201ENST00000429312 1336 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 RNU6-600P-201ENST00000362524 99 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 RNU6-1214P-201ENST00000363650 109 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 RNU1-112P-201ENST00000364401 164 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 RNU6-335P-201ENST00000364563 113 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 MIR34A-201ENST00000385130 110 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 RNU6-821P-201ENST00000390995 107 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 AL360182.1-201ENST00000397433 468 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 MIR887-201ENST00000401258 79 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 MIR1284-201ENST00000408337 120 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 SNORD88.1-201ENST00000408684 91 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 RNU2-15P-201ENST00000410692 191 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 RNA5SP21-201ENST00000410917 96 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 TIMM9P2-201ENST00000419324 266 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 AC011233.1-201ENST00000422812 283 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 AL513043.1-201ENST00000439124 535 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 MTCO2P25-201ENST00000447065 681 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 MTCYBP11-201ENST00000447254 1109 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 AC108938.1-201ENST00000451204 136 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 SNORD11.1-201ENST00000459482 85 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 SNRPGP3-201ENST00000469405 227 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 AC010285.1-201ENST00000470580 392 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 RPL7P18-201ENST00000478965 734 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 RPL31P13-201ENST00000484151 370 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 AC147055.4-201ENST00000504399 745 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 RN7SKP287-201ENST00000516546 266 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 OR5AK1P-201ENST00000524837 922 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 AP004371.1-201ENST00000525240 214 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 DEFB131D-201ENST00000526803 184 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 AP003385.6-201ENST00000531603 374 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 OR4T1P-201ENST00000554933 911 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms