Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.73□□□□□ -2.13
TRAV3A0A0B4J244 AL359693.1-201ENST00000614959 2407 ntBASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 MTND5P6-201ENST00000422338 1798 ntBASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 CR848007.1-201ENST00000442354 1699 ntBASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 RNU6-77P-201ENST00000410554 91 ntBASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 AL009174.1-201ENST00000426577 416 ntBASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 AL035410.1-201ENST00000427409 427 ntBASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 MTND4LP10-201ENST00000435146 291 ntBASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 HIGD1AP2-201ENST00000446367 280 ntBASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 AC233279.1-201ENST00000455300 423 ntBASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 RPL23AP70-201ENST00000483361 460 ntBASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 RPS15AP34-201ENST00000487776 387 ntBASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 AC090096.1-201ENST00000489168 390 ntBASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 RNA5SP200-201ENST00000516360 103 ntBASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 AP003122.3-201ENST00000526316 255 ntBASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 AMZ2P1-203ENST00000565833 850 ntBASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 AC090616.3-201ENST00000582184 217 ntBASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 AC007938.3-201ENST00000604965 623 ntBASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 AP001033.2-201ENST00000609701 1003 ntBASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 AP000553.5-201ENST00000641933 54 ntBASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
TRAV3A0A0B4J244 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 MIR449A-201ENST00000362113 91 ntBASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 RNU6-1155P-201ENST00000363554 107 ntBASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 RNU6-173P-201ENST00000364215 104 ntBASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 AL589655.1-201ENST00000405398 482 ntBASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 BTF3P7-201ENST00000407097 488 ntBASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 UBE2V1P11-201ENST00000411559 285 ntBASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 VN1R51P-201ENST00000411675 945 ntBASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 Z82209.1-201ENST00000422141 2135 ntBASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 Z93242.1-201ENST00000427102 353 ntBASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 SDR42E1P3-201ENST00000438345 502 ntBASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 AL714022.1-201ENST00000439897 151 ntBASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 RPS26P30-201ENST00000443431 335 ntBASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 RPL32P28-201ENST00000443577 397 ntBASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 AL021397.1-201ENST00000451806 248 ntBASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 RPL23AP23-201ENST00000452590 471 ntBASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 RNU6-717P-201ENST00000459076 104 ntBASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 RBM43P1-201ENST00000476891 1081 ntBASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 AC116337.2-201ENST00000477662 156 ntBASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 AC090255.1-201ENST00000495779 349 ntBASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 AC091917.2-201ENST00000505002 744 ntBASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 AC114322.1-201ENST00000506771 926 ntBASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 AC104108.1-201ENST00000509930 412 ntBASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 OR5BM1P-201ENST00000512021 366 ntBASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 CASP1P1-201ENST00000526345 212 ntBASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 AC010546.1-201ENST00000569391 485 ntBASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 AC011260.1-201ENST00000578420 472 ntBASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 BNIP3P4-201ENST00000604946 565 ntBASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 AC009318.4-201ENST00000620496 486 ntBASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
TRAV3A0A0B4J244 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
TRAV3A0A0B4J244 RNU4-82P-201ENST00000362443 140 ntBASIC1.7□□□□□ -2.14
TRAV3A0A0B4J244 SNORD115-48-201ENST00000364764 76 ntBASIC1.7□□□□□ -2.14
TRAV3A0A0B4J244 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
TRAV3A0A0B4J244 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.7□□□□□ -2.14
TRAV3A0A0B4J244 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
TRAV3A0A0B4J244 RNA5SP338-201ENST00000410495 85 ntBASIC1.7□□□□□ -2.14
TRAV3A0A0B4J244 AL133384.1-201ENST00000412744 351 ntBASIC1.7□□□□□ -2.14
TRAV3A0A0B4J244 MTND4P24-201ENST00000424002 397 ntBASIC1.7□□□□□ -2.14
TRAV3A0A0B4J244 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.7□□□□□ -2.14
TRAV3A0A0B4J244 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAV3A0A0B4J244 AC093422.3-201ENST00000428506 305 ntBASIC1.7□□□□□ -2.14
TRAV3A0A0B4J244 AL035407.1-201ENST00000429211 571 ntBASIC1.7□□□□□ -2.14
TRAV3A0A0B4J244 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.7□□□□□ -2.14
TRAV3A0A0B4J244 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
TRAV3A0A0B4J244 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms