Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 RNU6-628P-201ENST00000410675 107 ntBASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 AL592148.1-201ENST00000413568 445 ntBASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 AC099548.1-201ENST00000421443 426 ntBASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 RPS29P7-201ENST00000439662 171 ntBASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 DNAJC19P4-201ENST00000440115 345 ntBASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 AL357134.1-201ENST00000445848 426 ntBASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 C1DP3-201ENST00000455013 423 ntBASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 RPL21P99-201ENST00000480369 423 ntBASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 RNA5SP320-201ENST00000516263 124 ntBASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 MIR892C-201ENST00000516410 77 ntBASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 AP005435.4-201ENST00000529514 284 ntBASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 AC007458.1-201ENST00000542812 373 ntBASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 AC074050.1-201ENST00000563247 211 ntBASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 MIR5680-201ENST00000577577 84 ntBASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 MIR4489-201ENST00000578869 62 ntBASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 MIR3199-1-201ENST00000582434 88 ntBASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 AL606834.2-201ENST00000602954 668 ntBASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 AC093838.1-201ENST00000613014 469 ntBASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 AC012150.2-201ENST00000621300 544 ntBASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 OR8B1P-202ENST00000641132 1178 ntBASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC0.97□□□□□ -2.25
LINC01558Q9Y6Z2 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 MTCO1P11-201ENST00000429111 1528 ntBASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 MIR126-201ENST00000362291 85 ntBASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 SNORA70.4-201ENST00000365509 134 ntBASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 SNORA5A-201ENST00000384111 134 ntBASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 SNORA18.3-201ENST00000384122 132 ntBASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 SNORA51.12-201ENST00000384448 134 ntBASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 MIR490-201ENST00000384865 128 ntBASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 MIR221-201ENST00000385135 110 ntBASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 U3.19-201ENST00000390893 196 ntBASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 AL035405.1-201ENST00000400795 710 ntBASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 AL158823.1-201ENST00000418441 478 ntBASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 GAS5-208ENST00000425771 242 ntTSL 3 BASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 AC027124.2-201ENST00000428249 105 ntBASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 MRPL35P4-201ENST00000453682 566 ntBASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 FPGT-203ENST00000467578 601 ntTSL 2 BASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 RPL7P51-201ENST00000490532 749 ntBASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 AC021146.2-201ENST00000504736 556 ntBASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 AL133241.1-201ENST00000556832 487 ntBASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 MIR4419B-201ENST00000577260 68 ntBASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 CBX3P2-202ENST00000583365 535 ntBASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 NRBF2P1-201ENST00000587407 859 ntBASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 AC006023.1-201ENST00000603944 259 ntBASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 AC110792.4-201ENST00000609843 298 ntBASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 AL773524.1-201ENST00000614065 229 ntBASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 AC040168.1-201ENST00000623594 991 ntBASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 AC068057.2-201ENST00000624047 895 ntBASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 AP003400.5-201ENST00000624827 617 ntBASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
LINC01558Q9Y6Z2 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 AL589655.1-201ENST00000405398 482 ntBASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 EIF1AXP1-201ENST00000419267 435 ntBASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 AC244636.1-201ENST00000421152 228 ntBASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 AC009480.2-201ENST00000422916 432 ntBASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 180.3 ms