Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 IGKV2D-36-201ENST00000518643 226 ntBASIC2.19□□□□□ -2.06
SCN10AQ9Y5Y9 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.19□□□□□ -2.06
SCN10AQ9Y5Y9 MIR4255-201ENST00000579351 72 ntBASIC2.19□□□□□ -2.06
SCN10AQ9Y5Y9 AL356575.1-201ENST00000603008 283 ntBASIC2.19□□□□□ -2.06
SCN10AQ9Y5Y9 RPAP2P1-201ENST00000603626 1168 ntBASIC2.19□□□□□ -2.06
SCN10AQ9Y5Y9 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.19□□□□□ -2.06
SCN10AQ9Y5Y9 ZNF734P-201ENST00000419494 1534 ntBASIC2.19□□□□□ -2.06
SCN10AQ9Y5Y9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 RPL23AP36-201ENST00000413895 458 ntBASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 RAD23BP2-201ENST00000416003 1207 ntBASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 AL645638.1-201ENST00000440519 361 ntBASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 AL591719.1-201ENST00000444669 744 ntBASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 FABP5P13-201ENST00000452144 328 ntBASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 HSPE1P20-201ENST00000538133 289 ntBASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 AC004486.1-201ENST00000546846 233 ntBASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 AC245036.5-201ENST00000596330 847 ntBASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 ADAM3A-203ENST00000461344 2157 ntBASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 RNU6-1151P-201ENST00000384684 107 ntBASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 NPM1P10-201ENST00000398310 865 ntBASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 Z86062.1-201ENST00000406773 777 ntBASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 snoU13.18-201ENST00000459483 104 ntBASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 RPL36AP21-201ENST00000490372 323 ntBASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 AC087241.2-201ENST00000535801 324 ntBASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 MIR4448-201ENST00000584360 86 ntBASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.18□□□□□ -2.06
SCN10AQ9Y5Y9 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.17□□□□□ -2.06
SCN10AQ9Y5Y9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SCN10AQ9Y5Y9 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.17□□□□□ -2.06
SCN10AQ9Y5Y9 AP005901.5-201ENST00000545779 1796 ntBASIC2.17□□□□□ -2.06
SCN10AQ9Y5Y9 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
SCN10AQ9Y5Y9 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
SCN10AQ9Y5Y9 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.17□□□□□ -2.06
SCN10AQ9Y5Y9 AL445685.2-201ENST00000422551 342 ntBASIC2.17□□□□□ -2.06
SCN10AQ9Y5Y9 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.17□□□□□ -2.06
SCN10AQ9Y5Y9 AL590762.3-201ENST00000436372 640 ntBASIC2.17□□□□□ -2.06
SCN10AQ9Y5Y9 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.17□□□□□ -2.06
SCN10AQ9Y5Y9 AC068135.1-201ENST00000446164 246 ntBASIC2.17□□□□□ -2.06
SCN10AQ9Y5Y9 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.17□□□□□ -2.06
SCN10AQ9Y5Y9 snoU13.4-201ENST00000458916 104 ntBASIC2.17□□□□□ -2.06
SCN10AQ9Y5Y9 SNORD13-201ENST00000459299 104 ntBASIC2.17□□□□□ -2.06
SCN10AQ9Y5Y9 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.17□□□□□ -2.06
SCN10AQ9Y5Y9 AC007182.2-201ENST00000489251 402 ntBASIC2.17□□□□□ -2.06
SCN10AQ9Y5Y9 ARL4AP2-201ENST00000507378 601 ntBASIC2.17□□□□□ -2.06
SCN10AQ9Y5Y9 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.17□□□□□ -2.06
SCN10AQ9Y5Y9 AC025881.1-201ENST00000518851 512 ntBASIC2.17□□□□□ -2.06
SCN10AQ9Y5Y9 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.17□□□□□ -2.06
SCN10AQ9Y5Y9 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.17□□□□□ -2.06
SCN10AQ9Y5Y9 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.17□□□□□ -2.06
SCN10AQ9Y5Y9 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.17□□□□□ -2.06
SCN10AQ9Y5Y9 AL109659.3-201ENST00000624985 950 ntBASIC2.17□□□□□ -2.06
SCN10AQ9Y5Y9 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
SCN10AQ9Y5Y9 MAPK10-266ENST00000641066 6555 ntBASIC2.17□□□□□ -2.06
SCN10AQ9Y5Y9 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 RNU6-891P-201ENST00000384280 111 ntBASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 MIR7-1-201ENST00000384871 110 ntBASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 AC234781.2-201ENST00000426370 994 ntBASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 Z85994.2-201ENST00000434327 452 ntBASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 FABP5P3-201ENST00000437960 408 ntBASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 MTND2P19-201ENST00000449129 1012 ntBASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 HAUS1P3-201ENST00000523909 662 ntBASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 AP003385.6-201ENST00000531603 374 ntBASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 MIR4498-201ENST00000577599 66 ntBASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 Y_RNA.783-201ENST00000613546 102 ntBASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 MTND4P8-201ENST00000514997 1362 ntBASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 AC244517.1-201ENST00000606030 2086 ntBASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 RNU6-14P-201ENST00000384630 106 ntBASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 MTCO3P30-201ENST00000426425 670 ntBASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 Z82205.1-201ENST00000428456 297 ntBASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 RPL21P2-201ENST00000440049 481 ntBASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms