Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SEPT14P4-201ENST00000513445 186 ntBASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 FO082796.1-201ENST00000523795 183 ntBASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 FAM60DP-201ENST00000524174 632 ntBASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 AC010680.3-201ENST00000604215 520 ntBASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 AC007546.1-201ENST00000619452 559 ntBASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 AL136313.1-201ENST00000624804 202 ntBASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 AL645937.1-201ENST00000641739 1652 ntBASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 CKAP2P1-201ENST00000555477 2049 ntBASIC4.28□□□□□ -1.73
PCDHB1Q9Y5F3 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 AC073343.1-201ENST00000328239 651 ntBASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 RNU6-1284P-201ENST00000363701 100 ntBASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 RNU6-1279P-201ENST00000383917 103 ntBASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 MIR1-2-201ENST00000384961 85 ntBASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 MIR670-201ENST00000390142 98 ntBASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 SNORD66.1-201ENST00000391230 76 ntBASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 AC009237.5-201ENST00000414271 501 ntBASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 AL161631.1-201ENST00000417933 486 ntBASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 UBE2V1P7-201ENST00000446395 340 ntBASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 AL356010.1-201ENST00000456364 102 ntBASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 RNU6-420P-201ENST00000458780 107 ntBASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 AC126389.1-201ENST00000477436 290 ntBASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 AC117522.1-201ENST00000509821 380 ntBASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 AC006499.6-201ENST00000511169 607 ntBASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 RNU6-358P-201ENST00000516564 75 ntBASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 SNORA67.7-201ENST00000516664 135 ntBASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 IGLV3-26-201ENST00000520756 302 ntBASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 DEFB109D-201ENST00000529497 240 ntBASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 AC006064.5-201ENST00000541782 248 ntBASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 AC009994.1-201ENST00000606889 253 ntBASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 AL020991.1-201ENST00000612314 373 ntBASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 AC025253.1-201ENST00000613623 543 ntBASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 TUG1_2.1-201ENST00000614234 87 ntBASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 Y_RNA.804-201ENST00000615262 101 ntBASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 DUXAP9-208ENST00000622815 614 ntBASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 LARP1BP1-201ENST00000506036 1359 ntBASIC4.27□□□□□ -1.73
PCDHB1Q9Y5F3 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 AL158163.1-201ENST00000603915 1649 ntBASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 RNU4-48P-201ENST00000365559 182 ntBASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 RNU6-39P-201ENST00000384344 107 ntBASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 AL136372.1-201ENST00000403060 228 ntBASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 RNU2-9P-201ENST00000410194 145 ntBASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 RPL21P24-201ENST00000413752 448 ntBASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 OR51A5P-201ENST00000415429 942 ntBASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 EIF4EP1-201ENST00000422311 642 ntBASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 MTND4P28-201ENST00000426217 387 ntBASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 AL606489.2-201ENST00000433886 234 ntBASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 MTND5P20-201ENST00000448677 143 ntBASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 AL162389.1-201ENST00000449233 177 ntBASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 AC104164.2-201ENST00000496953 495 ntBASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 HSPD1P15-201ENST00000505573 1122 ntBASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 AL592156.1-201ENST00000508758 304 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms