Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 SPRR2C-201ENST00000290702 219 ntBASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 RNU1-130P-201ENST00000363930 160 ntBASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 RNU1-132P-201ENST00000364300 164 ntBASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 SNORD115-7-201ENST00000365306 82 ntBASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 RNU6-601P-201ENST00000384540 107 ntBASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 RNU2-15P-201ENST00000410692 191 ntBASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 MCFD2P1-201ENST00000417812 300 ntBASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 AL160004.2-201ENST00000432935 350 ntBASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 AC016696.1-201ENST00000446949 318 ntBASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 AC104058.1-201ENST00000448028 297 ntBASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 snoU109.6-201ENST00000516831 118 ntBASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 AC040958.1-201ENST00000561102 201 ntBASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 AC010653.1-201ENST00000571108 881 ntBASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 AC138761.3-201ENST00000579993 334 ntBASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 AL008729.2-201ENST00000606393 473 ntBASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 AL590099.1-201ENST00000615276 138 ntBASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 SNX18P1Y-201ENST00000616231 511 ntBASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 Z69720.2-201ENST00000624755 279 ntBASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 AC090337.1-201ENST00000579651 2074 ntBASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 AL031119.1-201ENST00000404707 1879 ntBASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 BDP1P-201ENST00000582658 1990 ntBASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 Y_RNA.47-201ENST00000362697 108 ntBASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 Y_RNA.135-201ENST00000363439 95 ntBASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 RNU6-702P-201ENST00000364982 107 ntBASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 RNU6-1040P-201ENST00000383974 107 ntBASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 RNU6-310P-201ENST00000384655 107 ntBASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 AL360182.1-201ENST00000397433 468 ntBASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 RPL21P67-201ENST00000402896 478 ntBASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 RPL6P29-201ENST00000414863 865 ntBASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 AC018865.2-201ENST00000423631 129 ntBASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 RPL23AP38-201ENST00000423801 469 ntBASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 EZH2P1-201ENST00000431167 291 ntBASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 AL132765.1-201ENST00000434165 553 ntBASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 AL353691.1-201ENST00000451332 387 ntBASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 AC053481.1-201ENST00000467217 306 ntBASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 AC079140.5-201ENST00000507882 310 ntBASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 SNORA25.10-201ENST00000515926 124 ntBASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 FAM60DP-201ENST00000524174 632 ntBASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 AL161670.1-201ENST00000554348 137 ntBASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 AL133153.1-201ENST00000557756 303 ntBASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 AL357559.1-201ENST00000622228 274 ntBASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 AC011978.2-201ENST00000569835 2054 ntBASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 EIF2AP4-201ENST00000424793 1781 ntBASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.78□□□□□ -1.48
RTCBQ9Y3I0 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RTCBQ9Y3I0 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.77□□□□□ -1.49
RTCBQ9Y3I0 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.77□□□□□ -1.49
RTCBQ9Y3I0 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
RTCBQ9Y3I0 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RTCBQ9Y3I0 MIR383-201ENST00000362257 73 ntBASIC5.77□□□□□ -1.49
RTCBQ9Y3I0 RNU6-1115P-201ENST00000362490 106 ntBASIC5.77□□□□□ -1.49
RTCBQ9Y3I0 RNU6-1287P-201ENST00000362914 107 ntBASIC5.77□□□□□ -1.49
RTCBQ9Y3I0 SNORD116-11-201ENST00000383882 92 ntBASIC5.77□□□□□ -1.49
RTCBQ9Y3I0 RNU6-1060P-201ENST00000384664 107 ntBASIC5.77□□□□□ -1.49
RTCBQ9Y3I0 Y_RNA.557-201ENST00000384680 107 ntBASIC5.77□□□□□ -1.49
RTCBQ9Y3I0 AP000580.1-201ENST00000404439 358 ntBASIC5.77□□□□□ -1.49
RTCBQ9Y3I0 PPIAP31-201ENST00000405422 495 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms