Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.21□□□□□ -1.41
ZC3H4Q9UPT8 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
ZC3H4Q9UPT8 AC083899.1-201ENST00000454465 3819 ntBASIC6.21□□□□□ -1.41
ZC3H4Q9UPT8 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
ZC3H4Q9UPT8 BCLAF1P2-201ENST00000624956 2609 ntBASIC6.21□□□□□ -1.42
ZC3H4Q9UPT8 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ZC3H4Q9UPT8 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
ZC3H4Q9UPT8 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
ZC3H4Q9UPT8 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ZC3H4Q9UPT8 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ZC3H4Q9UPT8 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ZC3H4Q9UPT8 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ZC3H4Q9UPT8 MTND5P7-201ENST00000413558 1798 ntBASIC6.21□□□□□ -1.42
ZC3H4Q9UPT8 Y_RNA.106-201ENST00000363189 100 ntBASIC6.21□□□□□ -1.42
ZC3H4Q9UPT8 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ZC3H4Q9UPT8 RPL23AP1-201ENST00000428990 471 ntBASIC6.21□□□□□ -1.42
ZC3H4Q9UPT8 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC6.21□□□□□ -1.42
ZC3H4Q9UPT8 AC008481.1-201ENST00000463278 396 ntBASIC6.21□□□□□ -1.42
ZC3H4Q9UPT8 AC105758.1-201ENST00000506038 399 ntBASIC6.21□□□□□ -1.42
ZC3H4Q9UPT8 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ZC3H4Q9UPT8 IGHV3-76-201ENST00000522465 295 ntBASIC6.21□□□□□ -1.42
ZC3H4Q9UPT8 AC023157.2-201ENST00000540596 141 ntBASIC6.21□□□□□ -1.42
ZC3H4Q9UPT8 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC6.21□□□□□ -1.42
ZC3H4Q9UPT8 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC6.21□□□□□ -1.42
ZC3H4Q9UPT8 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC6.21□□□□□ -1.42
ZC3H4Q9UPT8 AC125232.2-201ENST00000592457 143 ntBASIC6.21□□□□□ -1.42
ZC3H4Q9UPT8 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ZC3H4Q9UPT8 MIR92B-201ENST00000607575 96 ntBASIC6.21□□□□□ -1.42
ZC3H4Q9UPT8 SNHG22-203ENST00000617833 660 ntBASIC6.21□□□□□ -1.42
ZC3H4Q9UPT8 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 AP001029.2-203ENST00000589795 4910 ntBASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 AC006206.1-201ENST00000544842 3387 ntBASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 RNA5SP191-201ENST00000362585 102 ntBASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 RNU2-21P-201ENST00000410368 188 ntBASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 RPS15AP40-201ENST00000419621 391 ntBASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 VTI1BP4-201ENST00000427516 527 ntBASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 CEACAMP1-201ENST00000434624 1035 ntBASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 AL359672.1-201ENST00000442302 409 ntBASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 AC010655.1-201ENST00000449336 292 ntBASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 AC133473.1-201ENST00000455173 299 ntBASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 RNU6-1132P-201ENST00000459214 107 ntBASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 RPS23P3-201ENST00000470993 430 ntBASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 AC026402.1-201ENST00000513642 170 ntBASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 AC091516.1-201ENST00000549191 703 ntBASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 AL359547.2-201ENST00000615810 418 ntBASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 AC011944.2-201ENST00000624440 683 ntBASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
ZC3H4Q9UPT8 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 EIF2AP4-201ENST00000424793 1781 ntBASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 SAMMSON-226ENST00000642089 1582 ntBASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 AC068870.1-201ENST00000563737 2455 ntBASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 SNORD14.1-201ENST00000365609 90 ntBASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 SNORD51-201ENST00000384320 80 ntBASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 Y_RNA.515-201ENST00000384535 112 ntBASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 MIR1302-6-201ENST00000408466 90 ntBASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 RNU4-65P-201ENST00000410473 140 ntBASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 RN7SKP106-201ENST00000410832 272 ntBASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 RNU2-64P-201ENST00000411315 191 ntBASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 PSMA2P3-201ENST00000429685 675 ntBASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 AURKAPS2-201ENST00000454983 333 ntBASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 AC007967.1-201ENST00000455422 1159 ntBASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 CYCSP34-201ENST00000458172 304 ntBASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 AC245028.2-201ENST00000458673 253 ntBASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 MRPS33P2-201ENST00000507850 322 ntBASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 FTH1P9-201ENST00000513251 355 ntBASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 RNA5SP464-201ENST00000516251 108 ntBASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 Z98751.3-201ENST00000604447 521 ntBASIC6.19□□□□□ -1.42
ZC3H4Q9UPT8 MTND4LP5-201ENST00000605152 292 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms