Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.96□□□□□ -1.78
VPS4AQ9UN37 AC099489.2-201ENST00000574976 260 ntBASIC3.96□□□□□ -1.78
VPS4AQ9UN37 AC005255.1-201ENST00000593748 216 ntBASIC3.96□□□□□ -1.78
VPS4AQ9UN37 AC068790.3-201ENST00000602988 553 ntBASIC3.96□□□□□ -1.78
VPS4AQ9UN37 AL391646.1-201ENST00000603860 190 ntBASIC3.96□□□□□ -1.78
VPS4AQ9UN37 AL445363.3-201ENST00000623080 671 ntBASIC3.96□□□□□ -1.78
VPS4AQ9UN37 AC091905.1-201ENST00000624400 311 ntBASIC3.96□□□□□ -1.78
VPS4AQ9UN37 AP005264.7-201ENST00000625003 745 ntBASIC3.96□□□□□ -1.78
VPS4AQ9UN37 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.96□□□□□ -1.78
VPS4AQ9UN37 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
VPS4AQ9UN37 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VPS4AQ9UN37 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
VPS4AQ9UN37 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
VPS4AQ9UN37 ELF2P3-201ENST00000445099 1506 ntBASIC3.95□□□□□ -1.78
VPS4AQ9UN37 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.95□□□□□ -1.78
VPS4AQ9UN37 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 MIR423-201ENST00000362201 94 ntBASIC3.95□□□□□ -1.78
VPS4AQ9UN37 SNORA71.3-201ENST00000362582 128 ntBASIC3.95□□□□□ -1.78
VPS4AQ9UN37 RNU1-14P-201ENST00000362759 152 ntBASIC3.95□□□□□ -1.78
VPS4AQ9UN37 RNU6-181P-201ENST00000363225 107 ntBASIC3.95□□□□□ -1.78
VPS4AQ9UN37 RNU6-282P-201ENST00000365357 103 ntBASIC3.95□□□□□ -1.78
VPS4AQ9UN37 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 MIR483-201ENST00000385070 76 ntBASIC3.95□□□□□ -1.78
VPS4AQ9UN37 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 RPL7P60-201ENST00000397636 735 ntBASIC3.95□□□□□ -1.78
VPS4AQ9UN37 RPL21P65-201ENST00000406094 466 ntBASIC3.95□□□□□ -1.78
VPS4AQ9UN37 RNA5SP36-201ENST00000410197 133 ntBASIC3.95□□□□□ -1.78
VPS4AQ9UN37 RNU2-47P-201ENST00000410649 186 ntBASIC3.95□□□□□ -1.78
VPS4AQ9UN37 RNU4-55P-201ENST00000410731 137 ntBASIC3.95□□□□□ -1.78
VPS4AQ9UN37 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 AC019097.1-201ENST00000424783 735 ntBASIC3.95□□□□□ -1.78
VPS4AQ9UN37 BTF3P10-201ENST00000433415 495 ntBASIC3.95□□□□□ -1.78
VPS4AQ9UN37 GOT2P5-201ENST00000433995 546 ntBASIC3.95□□□□□ -1.78
VPS4AQ9UN37 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 TIMM9P1-201ENST00000436122 256 ntBASIC3.95□□□□□ -1.78
VPS4AQ9UN37 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 MTCO3P38-201ENST00000468910 766 ntBASIC3.95□□□□□ -1.78
VPS4AQ9UN37 ST13P14-201ENST00000474095 734 ntBASIC3.95□□□□□ -1.78
VPS4AQ9UN37 MTAPP1-201ENST00000489154 819 ntBASIC3.95□□□□□ -1.78
VPS4AQ9UN37 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 ARL2BPP6-201ENST00000512757 439 ntBASIC3.95□□□□□ -1.78
VPS4AQ9UN37 Vault.1-201ENST00000516474 102 ntBASIC3.95□□□□□ -1.78
VPS4AQ9UN37 RNU6-445P-201ENST00000516949 107 ntBASIC3.95□□□□□ -1.78
VPS4AQ9UN37 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 TRAV8-5-201ENST00000537369 341 ntBASIC3.95□□□□□ -1.78
VPS4AQ9UN37 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 AL845331.3-202ENST00000562856 261 ntBASIC3.95□□□□□ -1.78
VPS4AQ9UN37 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 AC092325.1-201ENST00000566449 554 ntBASIC3.95□□□□□ -1.78
VPS4AQ9UN37 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 KC877982.1-201ENST00000602313 470 ntBASIC3.95□□□□□ -1.78
VPS4AQ9UN37 AC011451.2-201ENST00000604303 598 ntBASIC3.95□□□□□ -1.78
VPS4AQ9UN37 AC055876.5-201ENST00000605667 259 ntBASIC3.95□□□□□ -1.78
VPS4AQ9UN37 AC007014.2-201ENST00000615581 479 ntBASIC3.95□□□□□ -1.78
VPS4AQ9UN37 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 AC006065.5-201ENST00000623427 349 ntBASIC3.95□□□□□ -1.78
VPS4AQ9UN37 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VPS4AQ9UN37 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
VPS4AQ9UN37 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VPS4AQ9UN37 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VPS4AQ9UN37 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.94□□□□□ -1.78
VPS4AQ9UN37 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.94□□□□□ -1.78
VPS4AQ9UN37 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.94□□□□□ -1.78
VPS4AQ9UN37 AC007685.1-201ENST00000329806 452 ntBASIC3.94□□□□□ -1.78
VPS4AQ9UN37 SNORA63.1-201ENST00000362493 131 ntBASIC3.94□□□□□ -1.78
VPS4AQ9UN37 Y_RNA.159-201ENST00000363674 87 ntBASIC3.94□□□□□ -1.78
VPS4AQ9UN37 RNU6-169P-201ENST00000365336 107 ntBASIC3.94□□□□□ -1.78
VPS4AQ9UN37 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
VPS4AQ9UN37 AL590704.1-201ENST00000402856 794 ntBASIC3.94□□□□□ -1.78
VPS4AQ9UN37 BTF3P7-201ENST00000407097 488 ntBASIC3.94□□□□□ -1.78
VPS4AQ9UN37 SNORA3C-201ENST00000408792 125 ntBASIC3.94□□□□□ -1.78
VPS4AQ9UN37 AC127391.1-201ENST00000411737 98 ntBASIC3.94□□□□□ -1.78
VPS4AQ9UN37 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.94□□□□□ -1.78
VPS4AQ9UN37 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.94□□□□□ -1.78
VPS4AQ9UN37 FTH1P6-201ENST00000430768 320 ntBASIC3.94□□□□□ -1.78
VPS4AQ9UN37 COX6B1P7-201ENST00000430845 235 ntBASIC3.94□□□□□ -1.78
VPS4AQ9UN37 CKS1BP5-201ENST00000434172 273 ntBASIC3.94□□□□□ -1.78
VPS4AQ9UN37 RPS4XP4-201ENST00000443195 763 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms