Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SCN11AQ9UI33 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SCN11AQ9UI33 MIR92A2-201ENST00000385299 75 ntBASIC2.11□□□□□ -2.07
SCN11AQ9UI33 RNA5SP489-201ENST00000410986 109 ntBASIC2.11□□□□□ -2.07
SCN11AQ9UI33 HMGB3P2-201ENST00000411913 584 ntBASIC2.11□□□□□ -2.07
SCN11AQ9UI33 BX682237.1-201ENST00000415016 335 ntBASIC2.11□□□□□ -2.07
SCN11AQ9UI33 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.11□□□□□ -2.07
SCN11AQ9UI33 BX510359.4-201ENST00000423750 193 ntBASIC2.11□□□□□ -2.07
SCN11AQ9UI33 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.11□□□□□ -2.07
SCN11AQ9UI33 AC114973.1-201ENST00000429057 632 ntBASIC2.11□□□□□ -2.07
SCN11AQ9UI33 RPS15AP17-201ENST00000470598 390 ntBASIC2.11□□□□□ -2.07
SCN11AQ9UI33 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.11□□□□□ -2.07
SCN11AQ9UI33 AP001029.3-201ENST00000588063 596 ntBASIC2.11□□□□□ -2.07
SCN11AQ9UI33 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SCN11AQ9UI33 PABPC1P9-201ENST00000426076 1612 ntBASIC2.11□□□□□ -2.07
SCN11AQ9UI33 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
SCN11AQ9UI33 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.11□□□□□ -2.07
SCN11AQ9UI33 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SCN11AQ9UI33 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SCN11AQ9UI33 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SCN11AQ9UI33 Z98749.2-208ENST00000381646 500 ntBASIC2.1□□□□□ -2.07
SCN11AQ9UI33 ANAPC10P1-201ENST00000395991 556 ntBASIC2.1□□□□□ -2.07
SCN11AQ9UI33 AC109780.2-201ENST00000413467 845 ntBASIC2.1□□□□□ -2.07
SCN11AQ9UI33 ELOCP6-201ENST00000429066 328 ntBASIC2.1□□□□□ -2.07
SCN11AQ9UI33 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.1□□□□□ -2.07
SCN11AQ9UI33 RPL17P49-201ENST00000443728 411 ntBASIC2.1□□□□□ -2.07
SCN11AQ9UI33 ELOCP12-201ENST00000458706 328 ntBASIC2.1□□□□□ -2.07
SCN11AQ9UI33 HMGN2P13-201ENST00000476476 274 ntBASIC2.1□□□□□ -2.07
SCN11AQ9UI33 AC069528.1-202ENST00000482888 637 ntBASIC2.1□□□□□ -2.07
SCN11AQ9UI33 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.1□□□□□ -2.07
SCN11AQ9UI33 RNU6-347P-201ENST00000516658 105 ntBASIC2.1□□□□□ -2.07
SCN11AQ9UI33 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.1□□□□□ -2.07
SCN11AQ9UI33 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.1□□□□□ -2.07
SCN11AQ9UI33 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.1□□□□□ -2.07
SCN11AQ9UI33 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.1□□□□□ -2.07
SCN11AQ9UI33 AP001180.3-201ENST00000582221 145 ntBASIC2.1□□□□□ -2.07
SCN11AQ9UI33 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
SCN11AQ9UI33 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SCN11AQ9UI33 MTND5P35-201ENST00000557537 1720 ntBASIC2.1□□□□□ -2.07
SCN11AQ9UI33 VN1R31P-201ENST00000417498 730 ntBASIC2.1□□□□□ -2.07
SCN11AQ9UI33 AC135721.1-201ENST00000497954 479 ntBASIC2.1□□□□□ -2.07
SCN11AQ9UI33 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.1□□□□□ -2.07
SCN11AQ9UI33 AC067805.1-201ENST00000559344 470 ntBASIC2.1□□□□□ -2.07
SCN11AQ9UI33 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
SCN11AQ9UI33 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
SCN11AQ9UI33 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.09□□□□□ -2.07
SCN11AQ9UI33 AL391987.6-201ENST00000305671 199 ntBASIC2.09□□□□□ -2.07
SCN11AQ9UI33 SNORD48-201ENST00000364953 64 ntBASIC2.09□□□□□ -2.07
SCN11AQ9UI33 RNU4-74P-201ENST00000411280 161 ntBASIC2.09□□□□□ -2.07
SCN11AQ9UI33 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.09□□□□□ -2.07
SCN11AQ9UI33 HSFY3P-201ENST00000444242 1191 ntBASIC2.09□□□□□ -2.07
SCN11AQ9UI33 Z96811.1-201ENST00000445880 108 ntBASIC2.09□□□□□ -2.07
SCN11AQ9UI33 DPPA3P1-201ENST00000448050 469 ntBASIC2.09□□□□□ -2.07
SCN11AQ9UI33 RPL21P104-201ENST00000464143 478 ntBASIC2.09□□□□□ -2.07
SCN11AQ9UI33 RPL23AP55-201ENST00000498163 452 ntBASIC2.09□□□□□ -2.07
SCN11AQ9UI33 IGLV3-17-201ENST00000519099 244 ntBASIC2.09□□□□□ -2.07
SCN11AQ9UI33 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.09□□□□□ -2.07
SCN11AQ9UI33 RN7SL622P-201ENST00000585292 275 ntBASIC2.09□□□□□ -2.07
SCN11AQ9UI33 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.08□□□□□ -2.08
SCN11AQ9UI33 MIR613-201ENST00000385248 95 ntBASIC2.08□□□□□ -2.08
SCN11AQ9UI33 FO393413.1-201ENST00000402892 195 ntBASIC2.08□□□□□ -2.08
SCN11AQ9UI33 MTND1P23-201ENST00000416931 372 ntBASIC2.08□□□□□ -2.08
SCN11AQ9UI33 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.08□□□□□ -2.08
SCN11AQ9UI33 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.08□□□□□ -2.08
SCN11AQ9UI33 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.08□□□□□ -2.08
SCN11AQ9UI33 TOMM22P6-201ENST00000465035 409 ntBASIC2.08□□□□□ -2.08
SCN11AQ9UI33 AC108734.3-201ENST00000481241 1165 ntBASIC2.08□□□□□ -2.08
SCN11AQ9UI33 RPS29P20-201ENST00000489592 171 ntBASIC2.08□□□□□ -2.08
SCN11AQ9UI33 AC109464.2-201ENST00000510242 943 ntBASIC2.08□□□□□ -2.08
SCN11AQ9UI33 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.08□□□□□ -2.08
SCN11AQ9UI33 MIR5694-201ENST00000581190 76 ntBASIC2.08□□□□□ -2.08
SCN11AQ9UI33 MIR4452-201ENST00000583004 71 ntBASIC2.08□□□□□ -2.08
SCN11AQ9UI33 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC2.08□□□□□ -2.08
SCN11AQ9UI33 DUXAP9-208ENST00000622815 614 ntBASIC2.08□□□□□ -2.08
SCN11AQ9UI33 MAPK10-266ENST00000641066 6555 ntBASIC2.08□□□□□ -2.08
SCN11AQ9UI33 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SCN11AQ9UI33 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.08□□□□□ -2.08
SCN11AQ9UI33 RPL30P3-201ENST00000424262 333 ntBASIC2.08□□□□□ -2.08
SCN11AQ9UI33 ARPC3P1-201ENST00000437218 533 ntBASIC2.08□□□□□ -2.08
SCN11AQ9UI33 LSM1P1-201ENST00000438629 273 ntBASIC2.08□□□□□ -2.08
SCN11AQ9UI33 AC109471.1-201ENST00000511631 612 ntBASIC2.08□□□□□ -2.08
SCN11AQ9UI33 SNORD59.2-201ENST00000516873 68 ntBASIC2.08□□□□□ -2.08
SCN11AQ9UI33 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.08□□□□□ -2.08
SCN11AQ9UI33 MIR3618-201ENST00000580330 88 ntBASIC2.08□□□□□ -2.08
SCN11AQ9UI33 MIR6895-201ENST00000613497 78 ntBASIC2.08□□□□□ -2.08
SCN11AQ9UI33 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SCN11AQ9UI33 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SCN11AQ9UI33 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
SCN11AQ9UI33 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SCN11AQ9UI33 AL136520.1-201ENST00000600311 1322 ntBASIC2.07□□□□□ -2.08
SCN11AQ9UI33 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SCN11AQ9UI33 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SCN11AQ9UI33 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.07□□□□□ -2.08
SCN11AQ9UI33 RNU6-1180P-201ENST00000364935 107 ntBASIC2.07□□□□□ -2.08
SCN11AQ9UI33 MIR144-201ENST00000384886 86 ntBASIC2.07□□□□□ -2.08
SCN11AQ9UI33 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.07□□□□□ -2.08
SCN11AQ9UI33 AC017099.1-201ENST00000448261 1028 ntBASIC2.07□□□□□ -2.08
SCN11AQ9UI33 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.07□□□□□ -2.08
SCN11AQ9UI33 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.07□□□□□ -2.08
SCN11AQ9UI33 RN7SKP234-201ENST00000517173 224 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms