Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 OR51AB1P-201ENST00000429046 620 ntBASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 C8orf59P1-201ENST00000429930 303 ntBASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 AC006539.3-201ENST00000454258 129 ntBASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 SNRPFP4-201ENST00000456366 242 ntBASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 HMGN1P18-201ENST00000457642 277 ntBASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 AC146507.1-201ENST00000468335 354 ntBASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 RPL7L1P8-201ENST00000469911 741 ntBASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 AC087312.1-201ENST00000471411 480 ntBASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 AP001025.2-201ENST00000490908 477 ntBASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 AC078918.1-201ENST00000498515 228 ntBASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 HMGN1P11-201ENST00000508668 303 ntBASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 MTCO3P44-201ENST00000510977 541 ntBASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 SNORA70.19-201ENST00000516717 90 ntBASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 OR4G1P-201ENST00000588632 938 ntBASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 TPMTP1-201ENST00000592307 737 ntBASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 RPL23AP92-201ENST00000603609 255 ntBASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 AC007566.2-201ENST00000603642 413 ntBASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 AP001148.1-201ENST00000624124 2359 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 RNU1-75P-201ENST00000347264 129 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 SNORA31-201ENST00000362607 130 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 RNA5SP197-201ENST00000363357 119 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 RNU6-853P-201ENST00000364306 107 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 RNVU1-3-201ENST00000364313 161 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 RNA5SP51-201ENST00000364750 119 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 RNA5SP189-201ENST00000364920 115 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 RPS3AP36-201ENST00000398190 775 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 RPS20P2-201ENST00000402520 389 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 AL445189.1-201ENST00000405722 338 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 Y_RNA.608-201ENST00000410647 95 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 RPS3AP3-201ENST00000411933 242 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 Z99755.1-201ENST00000414048 380 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 AL356968.1-201ENST00000416622 474 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 RPS15AP6-201ENST00000420703 385 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 RPL23AP82-202ENST00000427528 469 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 AL445584.1-201ENST00000431451 330 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 OR2B8P-201ENST00000432841 938 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 AC091862.1-201ENST00000438016 1100 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 PGBD4P3-201ENST00000440731 581 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 FAM103A2P-201ENST00000444122 354 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 AC093899.1-201ENST00000457984 376 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 AP001992.1-205ENST00000462248 379 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 CENPBD1P1-201ENST00000464061 469 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 ACTR3P3-201ENST00000480448 893 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 AC023424.2-201ENST00000493479 777 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 AL358832.1-201ENST00000497800 389 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 RNU4-60P-201ENST00000517239 135 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 IGKV2-23-201ENST00000518729 323 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 AC104027.1-201ENST00000521887 300 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 OR5D17P-201ENST00000531492 978 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 CENPUP2-201ENST00000555897 1186 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 MIR3186-201ENST00000577404 85 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 AC053481.3-201ENST00000577881 843 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 MTATP6P3-201ENST00000581686 676 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 AP003465.2-201ENST00000602571 373 ntBASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.62□□□□□ -1.83
SMARCAL1Q9NZC9 AC138749.5-201ENST00000611461 208 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms