Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.33□□□□□ -1.72
MKS1Q9NXB0 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.33□□□□□ -1.72
MKS1Q9NXB0 RPL23AP31-201ENST00000456160 467 ntBASIC4.33□□□□□ -1.72
MKS1Q9NXB0 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.33□□□□□ -1.72
MKS1Q9NXB0 RPS27AP17-201ENST00000463344 455 ntBASIC4.33□□□□□ -1.72
MKS1Q9NXB0 MRPS17P3-201ENST00000465453 385 ntBASIC4.33□□□□□ -1.72
MKS1Q9NXB0 RPL31P13-201ENST00000484151 370 ntBASIC4.33□□□□□ -1.72
MKS1Q9NXB0 RN7SL812P-201ENST00000493791 279 ntBASIC4.33□□□□□ -1.72
MKS1Q9NXB0 AC069439.1-201ENST00000494739 167 ntBASIC4.33□□□□□ -1.72
MKS1Q9NXB0 AC008638.1-201ENST00000506035 866 ntBASIC4.33□□□□□ -1.72
MKS1Q9NXB0 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
MKS1Q9NXB0 GMPSP1-201ENST00000514075 579 ntBASIC4.33□□□□□ -1.72
MKS1Q9NXB0 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.33□□□□□ -1.72
MKS1Q9NXB0 AP000827.1-201ENST00000527814 258 ntBASIC4.33□□□□□ -1.72
MKS1Q9NXB0 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.33□□□□□ -1.72
MKS1Q9NXB0 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.33□□□□□ -1.72
MKS1Q9NXB0 HMGN2P6-201ENST00000551091 273 ntBASIC4.33□□□□□ -1.72
MKS1Q9NXB0 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.33□□□□□ -1.72
MKS1Q9NXB0 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.33□□□□□ -1.72
MKS1Q9NXB0 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.33□□□□□ -1.72
MKS1Q9NXB0 AC055876.1-202ENST00000567053 138 ntBASIC4.33□□□□□ -1.72
MKS1Q9NXB0 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.33□□□□□ -1.72
MKS1Q9NXB0 MIR4737-201ENST00000583979 81 ntBASIC4.33□□□□□ -1.72
MKS1Q9NXB0 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.33□□□□□ -1.72
MKS1Q9NXB0 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.33□□□□□ -1.72
MKS1Q9NXB0 AC020910.2-201ENST00000603635 610 ntBASIC4.33□□□□□ -1.72
MKS1Q9NXB0 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
MKS1Q9NXB0 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.33□□□□□ -1.72
MKS1Q9NXB0 AC007546.1-201ENST00000619452 559 ntBASIC4.33□□□□□ -1.72
MKS1Q9NXB0 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.33□□□□□ -1.72
MKS1Q9NXB0 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.33□□□□□ -1.72
MKS1Q9NXB0 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
MKS1Q9NXB0 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
MKS1Q9NXB0 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.33□□□□□ -1.72
MKS1Q9NXB0 CKAP2P1-201ENST00000555477 2049 ntBASIC4.33□□□□□ -1.72
MKS1Q9NXB0 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
MKS1Q9NXB0 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
MKS1Q9NXB0 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
MKS1Q9NXB0 AL137003.2-201ENST00000606924 2538 ntBASIC4.32□□□□□ -1.72
MKS1Q9NXB0 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
MKS1Q9NXB0 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
MKS1Q9NXB0 AC109780.1-201ENST00000451768 1344 ntBASIC4.32□□□□□ -1.72
MKS1Q9NXB0 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
MKS1Q9NXB0 RNU6-877P-201ENST00000383868 107 ntBASIC4.32□□□□□ -1.72
MKS1Q9NXB0 MIR607-201ENST00000385241 96 ntBASIC4.32□□□□□ -1.72
MKS1Q9NXB0 MIR3065-201ENST00000390137 79 ntBASIC4.32□□□□□ -1.72
MKS1Q9NXB0 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
MKS1Q9NXB0 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
MKS1Q9NXB0 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.32□□□□□ -1.72
MKS1Q9NXB0 NDUFS5P1-201ENST00000405668 289 ntBASIC4.32□□□□□ -1.72
MKS1Q9NXB0 AC114491.1-201ENST00000416095 246 ntBASIC4.32□□□□□ -1.72
MKS1Q9NXB0 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.32□□□□□ -1.72
MKS1Q9NXB0 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.32□□□□□ -1.72
MKS1Q9NXB0 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.32□□□□□ -1.72
MKS1Q9NXB0 AC008850.1-201ENST00000427546 362 ntBASIC4.32□□□□□ -1.72
MKS1Q9NXB0 AC093106.2-201ENST00000428212 385 ntBASIC4.32□□□□□ -1.72
MKS1Q9NXB0 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.32□□□□□ -1.72
MKS1Q9NXB0 GTF2IP20-201ENST00000431663 360 ntBASIC4.32□□□□□ -1.72
MKS1Q9NXB0 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.32□□□□□ -1.72
MKS1Q9NXB0 BTF3P10-201ENST00000433415 495 ntBASIC4.32□□□□□ -1.72
MKS1Q9NXB0 SEPT14P3-201ENST00000439401 183 ntBASIC4.32□□□□□ -1.72
MKS1Q9NXB0 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.32□□□□□ -1.72
MKS1Q9NXB0 AL353572.1-201ENST00000442490 417 ntBASIC4.32□□□□□ -1.72
MKS1Q9NXB0 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.32□□□□□ -1.72
MKS1Q9NXB0 AL732372.2-207ENST00000445840 183 ntBASIC4.32□□□□□ -1.72
MKS1Q9NXB0 SEPT14P2-201ENST00000453405 183 ntBASIC4.32□□□□□ -1.72
MKS1Q9NXB0 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.32□□□□□ -1.72
MKS1Q9NXB0 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.32□□□□□ -1.72
MKS1Q9NXB0 HSPE1P6-201ENST00000479457 291 ntBASIC4.32□□□□□ -1.72
MKS1Q9NXB0 VN1R105P-201ENST00000486595 910 ntBASIC4.32□□□□□ -1.72
MKS1Q9NXB0 RPL7P47-201ENST00000497299 556 ntBASIC4.32□□□□□ -1.72
MKS1Q9NXB0 RPS27AP13-201ENST00000498403 237 ntBASIC4.32□□□□□ -1.72
MKS1Q9NXB0 SEPT14P4-201ENST00000513445 186 ntBASIC4.32□□□□□ -1.72
MKS1Q9NXB0 FO082796.1-201ENST00000523795 183 ntBASIC4.32□□□□□ -1.72
MKS1Q9NXB0 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.32□□□□□ -1.72
MKS1Q9NXB0 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.32□□□□□ -1.72
MKS1Q9NXB0 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.32□□□□□ -1.72
MKS1Q9NXB0 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.32□□□□□ -1.72
MKS1Q9NXB0 AC068831.4-201ENST00000556118 109 ntBASIC4.32□□□□□ -1.72
MKS1Q9NXB0 MED28P6-201ENST00000558776 231 ntBASIC4.32□□□□□ -1.72
MKS1Q9NXB0 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.32□□□□□ -1.72
MKS1Q9NXB0 AC005951.2-201ENST00000576282 495 ntBASIC4.32□□□□□ -1.72
MKS1Q9NXB0 AC024619.4-201ENST00000580924 316 ntBASIC4.32□□□□□ -1.72
MKS1Q9NXB0 AP001330.4-201ENST00000604350 154 ntBASIC4.32□□□□□ -1.72
MKS1Q9NXB0 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.32□□□□□ -1.72
MKS1Q9NXB0 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
MKS1Q9NXB0 AL354950.2-201ENST00000617939 290 ntBASIC4.32□□□□□ -1.72
MKS1Q9NXB0 AC233309.1-201ENST00000619522 751 ntBASIC4.32□□□□□ -1.72
MKS1Q9NXB0 YWHAEP7-203ENST00000622054 312 ntBASIC4.32□□□□□ -1.72
MKS1Q9NXB0 AC018445.2-201ENST00000622987 260 ntBASIC4.32□□□□□ -1.72
MKS1Q9NXB0 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.32□□□□□ -1.72
MKS1Q9NXB0 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
MKS1Q9NXB0 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.32□□□□□ -1.72
MKS1Q9NXB0 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
MKS1Q9NXB0 USP8P1-201ENST00000494673 3183 ntBASIC4.32□□□□□ -1.72
MKS1Q9NXB0 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
MKS1Q9NXB0 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
MKS1Q9NXB0 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.31□□□□□ -1.72
MKS1Q9NXB0 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
MKS1Q9NXB0 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms