Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 RNA5SP80-201ENST00000410475 111 ntBASIC3.04□□□□□ -1.92
HPF1Q9NWY4 RN7SKP123-201ENST00000410732 291 ntBASIC3.04□□□□□ -1.92
HPF1Q9NWY4 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HPF1Q9NWY4 AL449283.1-202ENST00000418249 604 ntBASIC3.04□□□□□ -1.92
HPF1Q9NWY4 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.04□□□□□ -1.92
HPF1Q9NWY4 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.04□□□□□ -1.92
HPF1Q9NWY4 FGF7P5-201ENST00000441829 291 ntBASIC3.04□□□□□ -1.92
HPF1Q9NWY4 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.04□□□□□ -1.92
HPF1Q9NWY4 MTCYBP3-201ENST00000445588 1137 ntBASIC3.04□□□□□ -1.92
HPF1Q9NWY4 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.04□□□□□ -1.92
HPF1Q9NWY4 RPS15AP27-201ENST00000449183 343 ntBASIC3.04□□□□□ -1.92
HPF1Q9NWY4 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.04□□□□□ -1.92
HPF1Q9NWY4 MTND1P9-201ENST00000453775 944 ntBASIC3.04□□□□□ -1.92
HPF1Q9NWY4 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.04□□□□□ -1.92
HPF1Q9NWY4 CENPBD1P1-201ENST00000464061 469 ntBASIC3.04□□□□□ -1.92
HPF1Q9NWY4 RPL31P41-201ENST00000477967 372 ntBASIC3.04□□□□□ -1.92
HPF1Q9NWY4 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.04□□□□□ -1.92
HPF1Q9NWY4 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.04□□□□□ -1.92
HPF1Q9NWY4 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.04□□□□□ -1.92
HPF1Q9NWY4 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.04□□□□□ -1.92
HPF1Q9NWY4 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.04□□□□□ -1.92
HPF1Q9NWY4 FABP5P12-201ENST00000515543 389 ntBASIC3.04□□□□□ -1.92
HPF1Q9NWY4 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.04□□□□□ -1.92
HPF1Q9NWY4 SNORA64.4-201ENST00000516632 81 ntBASIC3.04□□□□□ -1.92
HPF1Q9NWY4 RN7SKP40-201ENST00000517211 242 ntBASIC3.04□□□□□ -1.92
HPF1Q9NWY4 COX6CP8-201ENST00000522620 226 ntBASIC3.04□□□□□ -1.92
HPF1Q9NWY4 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.04□□□□□ -1.92
HPF1Q9NWY4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.04□□□□□ -1.92
HPF1Q9NWY4 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.04□□□□□ -1.92
HPF1Q9NWY4 AC005476.1-201ENST00000554427 397 ntBASIC3.04□□□□□ -1.92
HPF1Q9NWY4 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.04□□□□□ -1.92
HPF1Q9NWY4 AC103810.1-201ENST00000579873 453 ntBASIC3.04□□□□□ -1.92
HPF1Q9NWY4 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.04□□□□□ -1.92
HPF1Q9NWY4 AL606834.3-201ENST00000602615 496 ntBASIC3.04□□□□□ -1.92
HPF1Q9NWY4 AL355877.2-201ENST00000603670 358 ntBASIC3.04□□□□□ -1.92
HPF1Q9NWY4 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.04□□□□□ -1.92
HPF1Q9NWY4 MIR7112-201ENST00000616126 65 ntBASIC3.04□□□□□ -1.92
HPF1Q9NWY4 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
HPF1Q9NWY4 SNORD39.4-201ENST00000620099 78 ntBASIC3.04□□□□□ -1.92
HPF1Q9NWY4 AC103798.2-201ENST00000624292 632 ntBASIC3.04□□□□□ -1.92
HPF1Q9NWY4 MIR3651-201ENST00000630427 90 ntBASIC3.04□□□□□ -1.92
HPF1Q9NWY4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.04□□□□□ -1.92
HPF1Q9NWY4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
HPF1Q9NWY4 MTND5P24-201ENST00000438892 1767 ntBASIC3.03□□□□□ -1.92
HPF1Q9NWY4 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.03□□□□□ -1.92
HPF1Q9NWY4 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.03□□□□□ -1.92
HPF1Q9NWY4 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
HPF1Q9NWY4 RNU6-1207P-201ENST00000384343 107 ntBASIC3.03□□□□□ -1.92
HPF1Q9NWY4 MIR483-201ENST00000385070 76 ntBASIC3.03□□□□□ -1.92
HPF1Q9NWY4 RNU2-25P-201ENST00000411041 191 ntBASIC3.03□□□□□ -1.92
HPF1Q9NWY4 RPL19P1-201ENST00000411635 428 ntBASIC3.03□□□□□ -1.92
HPF1Q9NWY4 BX119904.4-201ENST00000424402 301 ntBASIC3.03□□□□□ -1.92
HPF1Q9NWY4 AL358075.3-201ENST00000426289 226 ntBASIC3.03□□□□□ -1.92
HPF1Q9NWY4 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.03□□□□□ -1.92
HPF1Q9NWY4 BNIP3P2-201ENST00000441221 577 ntBASIC3.03□□□□□ -1.92
HPF1Q9NWY4 AP1S2P1-201ENST00000457344 379 ntBASIC3.03□□□□□ -1.92
HPF1Q9NWY4 RPS20P20-201ENST00000460498 340 ntBASIC3.03□□□□□ -1.92
HPF1Q9NWY4 RPL30P9-201ENST00000465586 330 ntBASIC3.03□□□□□ -1.92
HPF1Q9NWY4 AC020893.1-201ENST00000502452 580 ntBASIC3.03□□□□□ -1.92
HPF1Q9NWY4 AC138853.1-201ENST00000503549 823 ntBASIC3.03□□□□□ -1.92
HPF1Q9NWY4 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.03□□□□□ -1.92
HPF1Q9NWY4 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.03□□□□□ -1.92
HPF1Q9NWY4 AC118282.1-201ENST00000506408 765 ntBASIC3.03□□□□□ -1.92
HPF1Q9NWY4 RNU6-150P-201ENST00000516237 95 ntBASIC3.03□□□□□ -1.92
HPF1Q9NWY4 AC118942.1-201ENST00000529674 1035 ntBASIC3.03□□□□□ -1.92
HPF1Q9NWY4 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.03□□□□□ -1.92
HPF1Q9NWY4 AC007536.1-201ENST00000533382 349 ntBASIC3.03□□□□□ -1.92
HPF1Q9NWY4 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.03□□□□□ -1.92
HPF1Q9NWY4 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.03□□□□□ -1.92
HPF1Q9NWY4 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.03□□□□□ -1.92
HPF1Q9NWY4 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.03□□□□□ -1.92
HPF1Q9NWY4 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.03□□□□□ -1.92
HPF1Q9NWY4 AL353997.4-201ENST00000586196 166 ntBASIC3.03□□□□□ -1.92
HPF1Q9NWY4 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.03□□□□□ -1.92
HPF1Q9NWY4 AC103710.4-201ENST00000609301 899 ntBASIC3.03□□□□□ -1.92
HPF1Q9NWY4 AL161734.1-201ENST00000609720 557 ntBASIC3.03□□□□□ -1.92
HPF1Q9NWY4 uc_338.1-201ENST00000612113 180 ntBASIC3.03□□□□□ -1.92
HPF1Q9NWY4 PART1_2.1-201ENST00000612397 250 ntBASIC3.03□□□□□ -1.92
HPF1Q9NWY4 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.03□□□□□ -1.92
HPF1Q9NWY4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HPF1Q9NWY4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
HPF1Q9NWY4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.93
HPF1Q9NWY4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HPF1Q9NWY4 CR848007.1-201ENST00000442354 1699 ntBASIC3.02□□□□□ -1.93
HPF1Q9NWY4 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HPF1Q9NWY4 NACA3P-201ENST00000359690 648 ntBASIC3.02□□□□□ -1.93
HPF1Q9NWY4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HPF1Q9NWY4 RNU1-109P-201ENST00000383960 147 ntBASIC3.02□□□□□ -1.93
HPF1Q9NWY4 RNU6-1000P-201ENST00000391066 106 ntBASIC3.02□□□□□ -1.93
HPF1Q9NWY4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.02□□□□□ -1.93
HPF1Q9NWY4 AC098614.2-201ENST00000426040 255 ntBASIC3.02□□□□□ -1.93
HPF1Q9NWY4 AC007919.1-201ENST00000429380 217 ntBASIC3.02□□□□□ -1.93
HPF1Q9NWY4 AC092427.1-202ENST00000430569 476 ntBASIC3.02□□□□□ -1.93
HPF1Q9NWY4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.02□□□□□ -1.93
HPF1Q9NWY4 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.02□□□□□ -1.93
HPF1Q9NWY4 WASF1P1-201ENST00000447560 1131 ntBASIC3.02□□□□□ -1.93
HPF1Q9NWY4 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.02□□□□□ -1.93
HPF1Q9NWY4 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HPF1Q9NWY4 OR6K1P-201ENST00000456766 971 ntBASIC3.02□□□□□ -1.93
HPF1Q9NWY4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms