Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 Y_RNA.304-201ENST00000365011 112 ntBASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 SNORD115-46-201ENST00000390982 71 ntBASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 RNU6-735P-201ENST00000410612 107 ntBASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 RNU6-516P-201ENST00000411381 104 ntBASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 AL590399.2-201ENST00000427536 309 ntBASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 AC008264.1-201ENST00000447612 367 ntBASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 RPL32P33-201ENST00000487023 394 ntBASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 RPL7P23-201ENST00000493874 747 ntBASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 ACA59.1-201ENST00000515966 143 ntBASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 AC008694.2-201ENST00000517591 306 ntBASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 AC024405.2-202ENST00000532731 184 ntBASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 IRF5P1-201ENST00000504852 2164 ntBASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 AC009951.1-201ENST00000623674 2614 ntBASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
CUEDC1Q9NWM3 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 Y_RNA.8-201ENST00000362353 102 ntBASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 U3.7-201ENST00000363668 216 ntBASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 SMIM11P1-201ENST00000369586 178 ntBASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 SNORA70-201ENST00000384436 135 ntBASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 RNA5SP91-201ENST00000390902 119 ntBASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 RPS4XP7-201ENST00000406274 780 ntBASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 CRIP1P1-201ENST00000427567 185 ntBASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 RPL12P39-201ENST00000455456 496 ntBASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 RPS23P6-201ENST00000466136 431 ntBASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 RPS24P16-201ENST00000497294 392 ntBASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 RN7SL466P-201ENST00000497546 295 ntBASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 AC135721.1-201ENST00000497954 479 ntBASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 RNU6-346P-201ENST00000516288 111 ntBASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 RNU6-62P-201ENST00000516526 102 ntBASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 SNORA70.20-201ENST00000516848 126 ntBASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 AC069113.1-201ENST00000517763 267 ntBASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 CDH12P4-201ENST00000517835 295 ntBASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 CDH12P3-201ENST00000517935 295 ntBASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 CDH12P1-201ENST00000518435 295 ntBASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 AC136777.2-201ENST00000522979 358 ntBASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 AC126615.2-201ENST00000553003 515 ntBASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 AC096996.1-201ENST00000563813 325 ntBASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 AC174048.1-201ENST00000603389 144 ntBASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 AC073657.2-201ENST00000605661 303 ntBASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 RNA5SP108-201ENST00000605921 117 ntBASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 AL022394.1-201ENST00000606979 292 ntBASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 AL133481.2-203ENST00000607558 139 ntBASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 AL161616.1-201ENST00000611867 286 ntBASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
CUEDC1Q9NWM3 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 FAM91A3P-201ENST00000456826 2544 ntBASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 AP000560.1-201ENST00000624150 1937 ntBASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms