Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 AC079395.3-201ENST00000615161 484 ntBASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 MTND4P1-201ENST00000457501 1466 ntBASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 RPL32P3-201ENST00000359025 275 ntBASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 SNORA68.1-201ENST00000364537 132 ntBASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 SNRPEP2-201ENST00000397592 279 ntBASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 AL122016.1-201ENST00000403365 367 ntBASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 HMGB3P2-201ENST00000411913 584 ntBASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 UBE2V1P13-201ENST00000436983 439 ntBASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 AL445687.1-201ENST00000439946 251 ntBASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 MRPL42P6-201ENST00000486397 371 ntBASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 GTF2IP9-201ENST00000502460 301 ntBASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 AC112673.1-201ENST00000513168 575 ntBASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 RNU6-1256P-201ENST00000516539 103 ntBASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 RNU6-1282P-201ENST00000516735 96 ntBASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 RNA5SP471-201ENST00000516971 106 ntBASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 AC009812.2-201ENST00000517657 457 ntBASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 CKS1BP7-201ENST00000522230 235 ntBASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 CR392039.5-201ENST00000623201 510 ntBASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
VCX3AQ9NNX9 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
VCX3AQ9NNX9 AL049641.1-201ENST00000441055 1948 ntBASIC2.34□□□□□ -2.04
VCX3AQ9NNX9 OR4G2P-202ENST00000641004 1759 ntBASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 AL049781.1-201ENST00000623195 3585 ntBASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 MIR514A1-201ENST00000385133 98 ntBASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 TAS2R15P-201ENST00000390674 928 ntBASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 AL592310.1-201ENST00000414330 671 ntBASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 SRIP2-201ENST00000428470 166 ntBASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 MTCYBP45-201ENST00000435243 565 ntBASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 MTND4P15-201ENST00000437913 1033 ntBASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 FGF7P5-201ENST00000441829 291 ntBASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 snoU13.22-201ENST00000459428 104 ntBASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 RPL23AP45-201ENST00000476406 468 ntBASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 AC114322.1-201ENST00000506771 926 ntBASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 snoZ278.1-201ENST00000517059 112 ntBASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 AC078814.3-201ENST00000553036 491 ntBASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 H3F3AP1-201ENST00000559984 334 ntBASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 RPL23AP84-201ENST00000571193 464 ntBASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 MIR3117-201ENST00000584034 78 ntBASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 MIR4658-201ENST00000584344 65 ntBASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 AL022067.1-201ENST00000602426 454 ntBASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 AL606834.2-201ENST00000602954 668 ntBASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 MIR6820-201ENST00000611508 62 ntBASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 AC093838.1-201ENST00000613014 469 ntBASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 AL022578.1-201ENST00000439330 1433 ntBASIC2.33□□□□□ -2.04
VCX3AQ9NNX9 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 SNORA63.1-201ENST00000362493 131 ntBASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 RNU5B-1-201ENST00000363286 116 ntBASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms