Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC012442.3-202ENST00000636742 206 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 AC090337.1-201ENST00000579651 2074 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDH9Q9HC56 TNPO1P3-201ENST00000436471 2662 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.62□□□□□ -1.83
PCDH9Q9HC56 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDH9Q9HC56 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PCDH9Q9HC56 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PCDH9Q9HC56 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDH9Q9HC56 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PCDH9Q9HC56 Y_RNA.505-201ENST00000384489 102 ntBASIC3.61□□□□□ -1.83
PCDH9Q9HC56 RNU6-297P-201ENST00000384636 107 ntBASIC3.61□□□□□ -1.83
PCDH9Q9HC56 Y_RNA.619-201ENST00000410951 90 ntBASIC3.61□□□□□ -1.83
PCDH9Q9HC56 HMGB3P23-201ENST00000414981 585 ntBASIC3.61□□□□□ -1.83
PCDH9Q9HC56 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDH9Q9HC56 AIMP1P1-201ENST00000418670 937 ntBASIC3.61□□□□□ -1.83
PCDH9Q9HC56 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.61□□□□□ -1.83
PCDH9Q9HC56 AC104651.1-201ENST00000427559 735 ntBASIC3.61□□□□□ -1.83
PCDH9Q9HC56 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.61□□□□□ -1.83
PCDH9Q9HC56 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.61□□□□□ -1.83
PCDH9Q9HC56 AC091862.1-201ENST00000438016 1100 ntBASIC3.61□□□□□ -1.83
PCDH9Q9HC56 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDH9Q9HC56 AC092641.1-201ENST00000440229 772 ntBASIC3.61□□□□□ -1.83
PCDH9Q9HC56 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDH9Q9HC56 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.61□□□□□ -1.83
PCDH9Q9HC56 COX7A2P2-201ENST00000505291 250 ntBASIC3.61□□□□□ -1.83
PCDH9Q9HC56 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDH9Q9HC56 AC006390.1-201ENST00000508068 283 ntBASIC3.61□□□□□ -1.83
PCDH9Q9HC56 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PCDH9Q9HC56 AC104619.4-201ENST00000510773 249 ntBASIC3.61□□□□□ -1.83
PCDH9Q9HC56 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.61□□□□□ -1.83
PCDH9Q9HC56 RNU6-405P-201ENST00000516637 110 ntBASIC3.61□□□□□ -1.83
PCDH9Q9HC56 AC022878.1-201ENST00000530684 149 ntBASIC3.61□□□□□ -1.83
PCDH9Q9HC56 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.61□□□□□ -1.83
PCDH9Q9HC56 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.61□□□□□ -1.83
PCDH9Q9HC56 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.61□□□□□ -1.83
PCDH9Q9HC56 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDH9Q9HC56 ZNF415P1-201ENST00000582279 1166 ntBASIC3.61□□□□□ -1.83
PCDH9Q9HC56 AL353997.4-201ENST00000586196 166 ntBASIC3.61□□□□□ -1.83
PCDH9Q9HC56 AC092354.2-201ENST00000607786 514 ntBASIC3.61□□□□□ -1.83
PCDH9Q9HC56 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.61□□□□□ -1.83
PCDH9Q9HC56 AC092125.1-201ENST00000562568 1995 ntBASIC3.61□□□□□ -1.83
PCDH9Q9HC56 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
PCDH9Q9HC56 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PCDH9Q9HC56 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDH9Q9HC56 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.6□□□□□ -1.83
PCDH9Q9HC56 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDH9Q9HC56 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
PCDH9Q9HC56 RNU6-97P-201ENST00000363387 104 ntBASIC3.6□□□□□ -1.83
PCDH9Q9HC56 Y_RNA.234-201ENST00000364409 97 ntBASIC3.6□□□□□ -1.83
PCDH9Q9HC56 SNORA62.3-201ENST00000365110 153 ntBASIC3.6□□□□□ -1.83
PCDH9Q9HC56 RNU6-1042P-201ENST00000384204 107 ntBASIC3.6□□□□□ -1.83
PCDH9Q9HC56 PTMAP2-201ENST00000397627 327 ntBASIC3.6□□□□□ -1.83
PCDH9Q9HC56 RPS20P2-201ENST00000402520 389 ntBASIC3.6□□□□□ -1.83
PCDH9Q9HC56 Y_RNA.599-201ENST00000410489 109 ntBASIC3.6□□□□□ -1.83
PCDH9Q9HC56 SYF2P2-201ENST00000417620 583 ntBASIC3.6□□□□□ -1.83
PCDH9Q9HC56 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.6□□□□□ -1.83
PCDH9Q9HC56 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.6□□□□□ -1.83
PCDH9Q9HC56 BX679664.1-201ENST00000434429 253 ntBASIC3.6□□□□□ -1.83
PCDH9Q9HC56 MTND1P34-201ENST00000438556 671 ntBASIC3.6□□□□□ -1.83
PCDH9Q9HC56 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.6□□□□□ -1.83
PCDH9Q9HC56 AL031667.1-201ENST00000440222 725 ntBASIC3.6□□□□□ -1.83
PCDH9Q9HC56 AL590399.6-201ENST00000446396 307 ntBASIC3.6□□□□□ -1.83
PCDH9Q9HC56 RPL29P29-201ENST00000448725 423 ntBASIC3.6□□□□□ -1.83
PCDH9Q9HC56 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.6□□□□□ -1.83
PCDH9Q9HC56 snoU109.1-201ENST00000459339 135 ntBASIC3.6□□□□□ -1.83
PCDH9Q9HC56 AC011825.1-201ENST00000484967 388 ntBASIC3.6□□□□□ -1.83
PCDH9Q9HC56 AC112204.1-201ENST00000502591 103 ntBASIC3.6□□□□□ -1.83
PCDH9Q9HC56 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.6□□□□□ -1.83
PCDH9Q9HC56 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PCDH9Q9HC56 SNORA70.18-201ENST00000516696 98 ntBASIC3.6□□□□□ -1.83
PCDH9Q9HC56 RN7SKP116-201ENST00000516902 319 ntBASIC3.6□□□□□ -1.83
PCDH9Q9HC56 RNU6-714P-201ENST00000516963 103 ntBASIC3.6□□□□□ -1.83
PCDH9Q9HC56 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.6□□□□□ -1.83
PCDH9Q9HC56 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.6□□□□□ -1.83
PCDH9Q9HC56 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.6□□□□□ -1.83
PCDH9Q9HC56 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.6□□□□□ -1.83
PCDH9Q9HC56 ZNF519P3-201ENST00000557158 1032 ntBASIC3.6□□□□□ -1.83
PCDH9Q9HC56 AC107954.1-201ENST00000565906 727 ntBASIC3.6□□□□□ -1.83
PCDH9Q9HC56 AC006116.10-201ENST00000591836 581 ntBASIC3.6□□□□□ -1.83
PCDH9Q9HC56 AC004492.1-201ENST00000607036 742 ntBASIC3.6□□□□□ -1.83
PCDH9Q9HC56 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.6□□□□□ -1.83
PCDH9Q9HC56 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.6□□□□□ -1.83
PCDH9Q9HC56 AL034408.1-202ENST00000636088 415 ntBASIC3.6□□□□□ -1.83
PCDH9Q9HC56 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
PCDH9Q9HC56 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.6□□□□□ -1.83
PCDH9Q9HC56 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PCDH9Q9HC56 AL513302.2-201ENST00000562313 1842 ntBASIC3.6□□□□□ -1.83
PCDH9Q9HC56 AC138915.3-201ENST00000562908 1389 ntBASIC3.6□□□□□ -1.83
PCDH9Q9HC56 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDH9Q9HC56 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PCDH9Q9HC56 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.6□□□□□ -1.83
PCDH9Q9HC56 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDH9Q9HC56 AC092447.7-201ENST00000422212 1621 ntBASIC3.59□□□□□ -1.83
PCDH9Q9HC56 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PCDH9Q9HC56 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PCDH9Q9HC56 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PCDH9Q9HC56 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDH9Q9HC56 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.59□□□□□ -1.83
PCDH9Q9HC56 Y_RNA.3-201ENST00000362331 103 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms