Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AP001784.1-201ENST00000624107 428 ntBASIC4.54□□□□□ -1.68
VPS11Q9H270 AL359757.2-201ENST00000624309 274 ntBASIC4.54□□□□□ -1.68
VPS11Q9H270 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS11Q9H270 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS11Q9H270 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS11Q9H270 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS11Q9H270 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS11Q9H270 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS11Q9H270 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VPS11Q9H270 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS11Q9H270 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS11Q9H270 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
VPS11Q9H270 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.53□□□□□ -1.68
VPS11Q9H270 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.53□□□□□ -1.68
VPS11Q9H270 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS11Q9H270 NXPH1-205ENST00000602349 1953 ntBASIC4.53□□□□□ -1.68
VPS11Q9H270 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
VPS11Q9H270 AL161781.1-201ENST00000354277 403 ntBASIC4.53□□□□□ -1.68
VPS11Q9H270 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
VPS11Q9H270 RNA5SP502-201ENST00000362694 119 ntBASIC4.53□□□□□ -1.68
VPS11Q9H270 RNU6-1026P-201ENST00000384465 108 ntBASIC4.53□□□□□ -1.68
VPS11Q9H270 RNU6-456P-201ENST00000384493 107 ntBASIC4.53□□□□□ -1.68
VPS11Q9H270 RNU6-1222P-201ENST00000384615 107 ntBASIC4.53□□□□□ -1.68
VPS11Q9H270 MIR1305-201ENST00000408300 86 ntBASIC4.53□□□□□ -1.68
VPS11Q9H270 AC127391.1-201ENST00000411737 98 ntBASIC4.53□□□□□ -1.68
VPS11Q9H270 MTCO2P27-201ENST00000420740 428 ntBASIC4.53□□□□□ -1.68
VPS11Q9H270 BEND7P1-201ENST00000422058 457 ntBASIC4.53□□□□□ -1.68
VPS11Q9H270 NANOGP6-201ENST00000429190 847 ntBASIC4.53□□□□□ -1.68
VPS11Q9H270 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.53□□□□□ -1.68
VPS11Q9H270 AL627308.1-201ENST00000435693 821 ntBASIC4.53□□□□□ -1.68
VPS11Q9H270 HLA-N-201ENST00000437516 135 ntBASIC4.53□□□□□ -1.68
VPS11Q9H270 AC069285.2-201ENST00000440210 275 ntBASIC4.53□□□□□ -1.68
VPS11Q9H270 RPL7P52-201ENST00000449200 742 ntBASIC4.53□□□□□ -1.68
VPS11Q9H270 AL645939.1-201ENST00000453429 797 ntBASIC4.53□□□□□ -1.68
VPS11Q9H270 RPS4XP10-201ENST00000465034 731 ntBASIC4.53□□□□□ -1.68
VPS11Q9H270 AC093267.1-201ENST00000489176 961 ntBASIC4.53□□□□□ -1.68
VPS11Q9H270 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.53□□□□□ -1.68
VPS11Q9H270 VWA8P1-201ENST00000510889 176 ntBASIC4.53□□□□□ -1.68
VPS11Q9H270 AC034159.1-201ENST00000513885 583 ntBASIC4.53□□□□□ -1.68
VPS11Q9H270 AC105417.1-201ENST00000514691 285 ntBASIC4.53□□□□□ -1.68
VPS11Q9H270 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS11Q9H270 SNORD60.2-201ENST00000516883 86 ntBASIC4.53□□□□□ -1.68
VPS11Q9H270 SNORA25.17-201ENST00000517184 124 ntBASIC4.53□□□□□ -1.68
VPS11Q9H270 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.53□□□□□ -1.68
VPS11Q9H270 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS11Q9H270 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.53□□□□□ -1.68
VPS11Q9H270 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS11Q9H270 CYP4A43P-201ENST00000568156 121 ntBASIC4.53□□□□□ -1.68
VPS11Q9H270 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS11Q9H270 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VPS11Q9H270 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
VPS11Q9H270 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS11Q9H270 AC007448.1-201ENST00000582714 234 ntBASIC4.53□□□□□ -1.68
VPS11Q9H270 TPMTP1-201ENST00000592307 737 ntBASIC4.53□□□□□ -1.68
VPS11Q9H270 AP000654.2-201ENST00000605633 586 ntBASIC4.53□□□□□ -1.68
VPS11Q9H270 AL133173.2-201ENST00000614270 90 ntBASIC4.53□□□□□ -1.68
VPS11Q9H270 HMGB1P24-202ENST00000615653 685 ntBASIC4.53□□□□□ -1.68
VPS11Q9H270 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS11Q9H270 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS11Q9H270 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS11Q9H270 AC012618.3-205ENST00000637896 1496 ntBASIC4.53□□□□□ -1.68
VPS11Q9H270 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.53□□□□□ -1.68
VPS11Q9H270 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS11Q9H270 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.52□□□□□ -1.69
VPS11Q9H270 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.52□□□□□ -1.69
VPS11Q9H270 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.52□□□□□ -1.69
VPS11Q9H270 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
VPS11Q9H270 RNA5SP507-201ENST00000363603 121 ntBASIC4.52□□□□□ -1.69
VPS11Q9H270 RHOT1P2-201ENST00000366423 333 ntBASIC4.52□□□□□ -1.69
VPS11Q9H270 RNU6-1297P-201ENST00000384415 104 ntBASIC4.52□□□□□ -1.69
VPS11Q9H270 RNU6-831P-201ENST00000384548 107 ntBASIC4.52□□□□□ -1.69
VPS11Q9H270 RNY4P36-201ENST00000391116 96 ntBASIC4.52□□□□□ -1.69
VPS11Q9H270 RPL23AP32-201ENST00000395315 459 ntBASIC4.52□□□□□ -1.69
VPS11Q9H270 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VPS11Q9H270 AL136116.1-201ENST00000403591 381 ntBASIC4.52□□□□□ -1.69
VPS11Q9H270 AL583834.1-201ENST00000406943 343 ntBASIC4.52□□□□□ -1.69
VPS11Q9H270 RNU2-3P-201ENST00000410144 191 ntBASIC4.52□□□□□ -1.69
VPS11Q9H270 RNA5SP104-201ENST00000410989 118 ntBASIC4.52□□□□□ -1.69
VPS11Q9H270 COX6CP17-201ENST00000421389 185 ntBASIC4.52□□□□□ -1.69
VPS11Q9H270 AC244098.2-201ENST00000422068 99 ntBASIC4.52□□□□□ -1.69
VPS11Q9H270 AL391219.1-201ENST00000422570 483 ntBASIC4.52□□□□□ -1.69
VPS11Q9H270 CEACAMP7-201ENST00000444105 496 ntBASIC4.52□□□□□ -1.69
VPS11Q9H270 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS11Q9H270 AC091685.2-201ENST00000454924 864 ntBASIC4.52□□□□□ -1.69
VPS11Q9H270 AL162395.1-201ENST00000457882 422 ntBASIC4.52□□□□□ -1.69
VPS11Q9H270 MTATP8P1-201ENST00000467115 207 ntBASIC4.52□□□□□ -1.69
VPS11Q9H270 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS11Q9H270 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS11Q9H270 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.52□□□□□ -1.69
VPS11Q9H270 RN7SKP276-201ENST00000516242 268 ntBASIC4.52□□□□□ -1.69
VPS11Q9H270 Vault.1-201ENST00000516474 102 ntBASIC4.52□□□□□ -1.69
VPS11Q9H270 Vault.3-201ENST00000516676 95 ntBASIC4.52□□□□□ -1.69
VPS11Q9H270 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS11Q9H270 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.52□□□□□ -1.69
VPS11Q9H270 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.52□□□□□ -1.69
VPS11Q9H270 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.52□□□□□ -1.69
VPS11Q9H270 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.52□□□□□ -1.69
VPS11Q9H270 MIR3167-201ENST00000579623 85 ntBASIC4.52□□□□□ -1.69
VPS11Q9H270 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS11Q9H270 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms