Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC073968.1-201ENST00000618594 637 ntBASIC2.74□□□□□ -1.97
UPF3BQ9BZI7 AC099063.3-201ENST00000642066 185 ntBASIC2.74□□□□□ -1.97
UPF3BQ9BZI7 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
UPF3BQ9BZI7 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
UPF3BQ9BZI7 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.73□□□□□ -1.97
UPF3BQ9BZI7 AC011460.1-201ENST00000636268 1834 ntBASIC2.73□□□□□ -1.97
UPF3BQ9BZI7 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
UPF3BQ9BZI7 RNU1-73P-201ENST00000383971 164 ntBASIC2.73□□□□□ -1.97
UPF3BQ9BZI7 AC007064.1-201ENST00000412238 351 ntBASIC2.73□□□□□ -1.97
UPF3BQ9BZI7 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.73□□□□□ -1.97
UPF3BQ9BZI7 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.73□□□□□ -1.97
UPF3BQ9BZI7 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.73□□□□□ -1.97
UPF3BQ9BZI7 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.73□□□□□ -1.97
UPF3BQ9BZI7 RAB11AP1-201ENST00000442978 646 ntBASIC2.73□□□□□ -1.97
UPF3BQ9BZI7 MTND2P19-201ENST00000449129 1012 ntBASIC2.73□□□□□ -1.97
UPF3BQ9BZI7 CKS1BP2-201ENST00000497342 240 ntBASIC2.73□□□□□ -1.97
UPF3BQ9BZI7 RN7SL636P-201ENST00000497504 294 ntBASIC2.73□□□□□ -1.97
UPF3BQ9BZI7 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.73□□□□□ -1.97
UPF3BQ9BZI7 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.73□□□□□ -1.97
UPF3BQ9BZI7 AC025281.1-201ENST00000567026 265 ntBASIC2.73□□□□□ -1.97
UPF3BQ9BZI7 MIR1273D-201ENST00000577266 86 ntBASIC2.73□□□□□ -1.97
UPF3BQ9BZI7 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.73□□□□□ -1.97
UPF3BQ9BZI7 AC012254.4-201ENST00000588843 273 ntBASIC2.73□□□□□ -1.97
UPF3BQ9BZI7 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.73□□□□□ -1.97
UPF3BQ9BZI7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.73□□□□□ -1.97
UPF3BQ9BZI7 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
UPF3BQ9BZI7 AC011890.2-201ENST00000613393 294 ntBASIC2.73□□□□□ -1.97
UPF3BQ9BZI7 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.73□□□□□ -1.97
UPF3BQ9BZI7 FRG1HP-204ENST00000617940 757 ntBASIC2.73□□□□□ -1.97
UPF3BQ9BZI7 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
UPF3BQ9BZI7 AL513185.3-201ENST00000433335 1300 ntBASIC2.72□□□□□ -1.97
UPF3BQ9BZI7 SNORD114-1-201ENST00000362705 72 ntBASIC2.72□□□□□ -1.97
UPF3BQ9BZI7 AL591416.1-201ENST00000404015 867 ntBASIC2.72□□□□□ -1.97
UPF3BQ9BZI7 RNU6-712P-201ENST00000410558 100 ntBASIC2.72□□□□□ -1.97
UPF3BQ9BZI7 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.72□□□□□ -1.97
UPF3BQ9BZI7 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.72□□□□□ -1.97
UPF3BQ9BZI7 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.72□□□□□ -1.97
UPF3BQ9BZI7 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.72□□□□□ -1.97
UPF3BQ9BZI7 BX248409.1-201ENST00000455497 255 ntBASIC2.72□□□□□ -1.97
UPF3BQ9BZI7 RPS27P23-201ENST00000487608 251 ntBASIC2.72□□□□□ -1.97
UPF3BQ9BZI7 MLLT10P2-201ENST00000506434 249 ntBASIC2.72□□□□□ -1.97
UPF3BQ9BZI7 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.72□□□□□ -1.97
UPF3BQ9BZI7 AP000889.2-201ENST00000532684 490 ntBASIC2.72□□□□□ -1.97
UPF3BQ9BZI7 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.72□□□□□ -1.97
UPF3BQ9BZI7 VN1R88P-201ENST00000596787 292 ntBASIC2.72□□□□□ -1.97
UPF3BQ9BZI7 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.72□□□□□ -1.97
UPF3BQ9BZI7 AP001330.4-201ENST00000604350 154 ntBASIC2.72□□□□□ -1.97
UPF3BQ9BZI7 AC016542.1-201ENST00000608259 493 ntBASIC2.72□□□□□ -1.97
UPF3BQ9BZI7 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
UPF3BQ9BZI7 MIR6766-201ENST00000622641 72 ntBASIC2.72□□□□□ -1.97
UPF3BQ9BZI7 AC026241.1-201ENST00000517873 2142 ntBASIC2.72□□□□□ -1.97
UPF3BQ9BZI7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
UPF3BQ9BZI7 AC131280.1-202ENST00000624067 4211 ntBASIC2.72□□□□□ -1.97
UPF3BQ9BZI7 ZNF720P1-201ENST00000562403 1939 ntBASIC2.72□□□□□ -1.97
UPF3BQ9BZI7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
UPF3BQ9BZI7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.97
UPF3BQ9BZI7 ADAM3A-203ENST00000461344 2157 ntBASIC2.71□□□□□ -1.97
UPF3BQ9BZI7 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
UPF3BQ9BZI7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
UPF3BQ9BZI7 AC087359.1-201ENST00000508335 1740 ntBASIC2.71□□□□□ -1.98
UPF3BQ9BZI7 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
UPF3BQ9BZI7 Y_RNA.338-201ENST00000365320 114 ntBASIC2.71□□□□□ -1.98
UPF3BQ9BZI7 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
UPF3BQ9BZI7 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
UPF3BQ9BZI7 AL356057.2-201ENST00000403318 432 ntBASIC2.71□□□□□ -1.98
UPF3BQ9BZI7 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
UPF3BQ9BZI7 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.71□□□□□ -1.98
UPF3BQ9BZI7 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.71□□□□□ -1.98
UPF3BQ9BZI7 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.71□□□□□ -1.98
UPF3BQ9BZI7 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.71□□□□□ -1.98
UPF3BQ9BZI7 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.71□□□□□ -1.98
UPF3BQ9BZI7 ATP5F1P1-201ENST00000433775 569 ntBASIC2.71□□□□□ -1.98
UPF3BQ9BZI7 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
UPF3BQ9BZI7 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.71□□□□□ -1.98
UPF3BQ9BZI7 AL031183.1-201ENST00000457667 207 ntBASIC2.71□□□□□ -1.98
UPF3BQ9BZI7 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC2.71□□□□□ -1.98
UPF3BQ9BZI7 AC010625.1-201ENST00000511296 403 ntBASIC2.71□□□□□ -1.98
UPF3BQ9BZI7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.71□□□□□ -1.98
UPF3BQ9BZI7 PRELID3BP4-201ENST00000515476 571 ntBASIC2.71□□□□□ -1.98
UPF3BQ9BZI7 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.71□□□□□ -1.98
UPF3BQ9BZI7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.71□□□□□ -1.98
UPF3BQ9BZI7 AC009163.5-201ENST00000575421 637 ntBASIC2.71□□□□□ -1.98
UPF3BQ9BZI7 MIR5007-201ENST00000583098 95 ntBASIC2.71□□□□□ -1.98
UPF3BQ9BZI7 AC024560.3-201ENST00000608482 349 ntBASIC2.71□□□□□ -1.98
UPF3BQ9BZI7 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
UPF3BQ9BZI7 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.71□□□□□ -1.98
UPF3BQ9BZI7 AC005336.3-201ENST00000623833 2679 ntBASIC2.71□□□□□ -1.98
UPF3BQ9BZI7 Y_RNA.164-201ENST00000363709 102 ntBASIC2.7□□□□□ -1.98
UPF3BQ9BZI7 MIR649-201ENST00000384843 97 ntBASIC2.7□□□□□ -1.98
UPF3BQ9BZI7 RNA5SP252-201ENST00000391131 119 ntBASIC2.7□□□□□ -1.98
UPF3BQ9BZI7 AF274854.1-201ENST00000413236 615 ntBASIC2.7□□□□□ -1.98
UPF3BQ9BZI7 TMEM167AP1-201ENST00000423409 219 ntBASIC2.7□□□□□ -1.98
UPF3BQ9BZI7 MTATP6P11-201ENST00000428071 670 ntBASIC2.7□□□□□ -1.98
UPF3BQ9BZI7 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.7□□□□□ -1.98
UPF3BQ9BZI7 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.7□□□□□ -1.98
UPF3BQ9BZI7 XKRY2-201ENST00000442362 1093 ntBASIC2.7□□□□□ -1.98
UPF3BQ9BZI7 AC104073.1-201ENST00000451988 151 ntBASIC2.7□□□□□ -1.98
UPF3BQ9BZI7 RPL23AP42-201ENST00000471152 471 ntBASIC2.7□□□□□ -1.98
UPF3BQ9BZI7 AC132942.1-201ENST00000486753 483 ntBASIC2.7□□□□□ -1.98
UPF3BQ9BZI7 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms