Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SSX3Q99909 GMPSP1-201ENST00000514075 579 ntBASIC3.03□□□□□ -1.92
SSX3Q99909 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.03□□□□□ -1.92
SSX3Q99909 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SSX3Q99909 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.03□□□□□ -1.92
SSX3Q99909 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.03□□□□□ -1.92
SSX3Q99909 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.03□□□□□ -1.92
SSX3Q99909 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SSX3Q99909 AC011602.1-201ENST00000546484 331 ntBASIC3.03□□□□□ -1.92
SSX3Q99909 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.03□□□□□ -1.92
SSX3Q99909 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.03□□□□□ -1.92
SSX3Q99909 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.03□□□□□ -1.92
SSX3Q99909 TGIF1P1-201ENST00000558095 802 ntBASIC3.03□□□□□ -1.92
SSX3Q99909 MIR544B-201ENST00000582372 78 ntBASIC3.03□□□□□ -1.92
SSX3Q99909 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.03□□□□□ -1.92
SSX3Q99909 AC008739.3-201ENST00000603262 127 ntBASIC3.03□□□□□ -1.92
SSX3Q99909 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.03□□□□□ -1.92
SSX3Q99909 AL159972.1-201ENST00000625150 448 ntBASIC3.03□□□□□ -1.92
SSX3Q99909 AL034408.1-202ENST00000636088 415 ntBASIC3.03□□□□□ -1.92
SSX3Q99909 AC244258.1-201ENST00000637553 1071 ntBASIC3.03□□□□□ -1.92
SSX3Q99909 OR8B1P-202ENST00000641132 1178 ntBASIC3.03□□□□□ -1.92
SSX3Q99909 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.02□□□□□ -1.93
SSX3Q99909 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.02□□□□□ -1.93
SSX3Q99909 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.02□□□□□ -1.93
SSX3Q99909 AL161912.2-201ENST00000565707 3007 ntBASIC3.02□□□□□ -1.93
SSX3Q99909 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.02□□□□□ -1.93
SSX3Q99909 TPTE2P4-201ENST00000258589 1605 ntBASIC3.02□□□□□ -1.93
SSX3Q99909 AC093908.1-201ENST00000623125 8092 ntBASIC3.02□□□□□ -1.93
SSX3Q99909 RNU6-55P-201ENST00000411092 107 ntBASIC3.02□□□□□ -1.93
SSX3Q99909 RNU6-954P-201ENST00000411355 107 ntBASIC3.02□□□□□ -1.93
SSX3Q99909 RNU6-516P-201ENST00000411381 104 ntBASIC3.02□□□□□ -1.93
SSX3Q99909 RPS7P13-201ENST00000413955 498 ntBASIC3.02□□□□□ -1.93
SSX3Q99909 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.02□□□□□ -1.93
SSX3Q99909 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.02□□□□□ -1.93
SSX3Q99909 AC245054.1-201ENST00000420944 258 ntBASIC3.02□□□□□ -1.93
SSX3Q99909 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.02□□□□□ -1.93
SSX3Q99909 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SSX3Q99909 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.02□□□□□ -1.93
SSX3Q99909 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.02□□□□□ -1.93
SSX3Q99909 AC011233.1-201ENST00000422812 283 ntBASIC3.02□□□□□ -1.93
SSX3Q99909 PPP1R11P2-201ENST00000423543 382 ntBASIC3.02□□□□□ -1.93
SSX3Q99909 AL593851.1-201ENST00000426171 157 ntBASIC3.02□□□□□ -1.93
SSX3Q99909 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.02□□□□□ -1.93
SSX3Q99909 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.02□□□□□ -1.93
SSX3Q99909 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SSX3Q99909 RPL23AP58-201ENST00000440453 469 ntBASIC3.02□□□□□ -1.93
SSX3Q99909 AL831737.1-201ENST00000441288 271 ntBASIC3.02□□□□□ -1.93
SSX3Q99909 FAM103A2P-201ENST00000444122 354 ntBASIC3.02□□□□□ -1.93
SSX3Q99909 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.02□□□□□ -1.93
SSX3Q99909 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.02□□□□□ -1.93
SSX3Q99909 RPS26P21-201ENST00000475397 348 ntBASIC3.02□□□□□ -1.93
SSX3Q99909 RPS3AP50-201ENST00000487064 803 ntBASIC3.02□□□□□ -1.93
SSX3Q99909 RN7SL283P-201ENST00000489055 303 ntBASIC3.02□□□□□ -1.93
SSX3Q99909 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.02□□□□□ -1.93
SSX3Q99909 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.02□□□□□ -1.93
SSX3Q99909 RN7SKP282-201ENST00000516824 299 ntBASIC3.02□□□□□ -1.93
SSX3Q99909 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.02□□□□□ -1.93
SSX3Q99909 HMGN1P28-201ENST00000521340 364 ntBASIC3.02□□□□□ -1.93
SSX3Q99909 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.02□□□□□ -1.93
SSX3Q99909 AC090877.1-201ENST00000561418 344 ntBASIC3.02□□□□□ -1.93
SSX3Q99909 AC060771.1-201ENST00000582031 164 ntBASIC3.02□□□□□ -1.93
SSX3Q99909 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.02□□□□□ -1.93
SSX3Q99909 AC007671.2-201ENST00000637344 619 ntBASIC3.02□□□□□ -1.93
SSX3Q99909 AC099063.3-201ENST00000642066 185 ntBASIC3.02□□□□□ -1.93
SSX3Q99909 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SSX3Q99909 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.02□□□□□ -1.93
SSX3Q99909 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
SSX3Q99909 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SSX3Q99909 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SSX3Q99909 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.01□□□□□ -1.93
SSX3Q99909 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.01□□□□□ -1.93
SSX3Q99909 AC091564.4-201ENST00000533934 2194 ntBASIC3.01□□□□□ -1.93
SSX3Q99909 AC009902.3-201ENST00000606235 2172 ntBASIC3.01□□□□□ -1.93
SSX3Q99909 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.01□□□□□ -1.93
SSX3Q99909 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.01□□□□□ -1.93
SSX3Q99909 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SSX3Q99909 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.01□□□□□ -1.93
SSX3Q99909 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SSX3Q99909 RNU5E-8P-201ENST00000363502 116 ntBASIC3.01□□□□□ -1.93
SSX3Q99909 SNORA5A-201ENST00000384111 134 ntBASIC3.01□□□□□ -1.93
SSX3Q99909 AC007066.1-201ENST00000392902 381 ntBASIC3.01□□□□□ -1.93
SSX3Q99909 TPMTP3-201ENST00000411928 735 ntBASIC3.01□□□□□ -1.93
SSX3Q99909 MTND1P21-201ENST00000412991 285 ntBASIC3.01□□□□□ -1.93
SSX3Q99909 AC069157.1-201ENST00000421749 137 ntBASIC3.01□□□□□ -1.93
SSX3Q99909 AL445669.1-201ENST00000426743 755 ntBASIC3.01□□□□□ -1.93
SSX3Q99909 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.01□□□□□ -1.93
SSX3Q99909 MTND5P25-201ENST00000430499 799 ntBASIC3.01□□□□□ -1.93
SSX3Q99909 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.01□□□□□ -1.93
SSX3Q99909 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.01□□□□□ -1.93
SSX3Q99909 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SSX3Q99909 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SSX3Q99909 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.01□□□□□ -1.93
SSX3Q99909 AC006480.1-201ENST00000449887 378 ntBASIC3.01□□□□□ -1.93
SSX3Q99909 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.01□□□□□ -1.93
SSX3Q99909 ATG12P2-201ENST00000456830 416 ntBASIC3.01□□□□□ -1.93
SSX3Q99909 SETP11-201ENST00000473027 690 ntBASIC3.01□□□□□ -1.93
SSX3Q99909 HSPE1P6-201ENST00000479457 291 ntBASIC3.01□□□□□ -1.93
SSX3Q99909 RPL30P5-201ENST00000494923 336 ntBASIC3.01□□□□□ -1.93
SSX3Q99909 DSTNP2-201ENST00000504533 515 ntBASIC3.01□□□□□ -1.93
SSX3Q99909 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms