Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AC106734.1-201ENST00000568646 663 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AL356274.1-201ENST00000617064 410 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 SNHG22-203ENST00000617833 660 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AC078938.1-201ENST00000620993 318 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AC110801.1-201ENST00000623590 212 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 ARNT2-207ENST00000533983 6690 ntAPPRIS ALT1 TSL 5 BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 AC123769.2-201ENST00000624332 5984 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 GPR161-210ENST00000546300 7388 ntTSL 2 BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 GAS7-204ENST00000437099 8003 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 RNU6-989P-201ENST00000362756 107 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 RNU6-1079P-201ENST00000362861 110 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 RNU4-42P-201ENST00000364738 142 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 Y_RNA.328-201ENST00000365208 113 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 SNORA40C-201ENST00000391285 128 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 UBE2V1P4-201ENST00000425374 344 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 AC093156.1-201ENST00000440382 670 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 OR52E3P-201ENST00000452083 936 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 AC053481.1-201ENST00000467217 306 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 AC025181.1-201ENST00000477507 416 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 TRBV8-1-201ENST00000481590 279 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 AC008628.2-201ENST00000502605 298 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 AC105252.1-201ENST00000503089 286 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 Y_RNA.677-201ENST00000516401 85 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 RNU6-388P-201ENST00000517012 105 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 RNU6-389P-201ENST00000517048 105 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 AC109446.2-201ENST00000567872 497 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 MRPS5P4-201ENST00000592830 325 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 LSM1P2-201ENST00000604911 322 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 IMMP1LP1-201ENST00000605170 488 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 SNORD115-40-201ENST00000606510 82 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 AL021879.1-201ENST00000611756 288 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 HIP1-201ENST00000336926 8013 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 OR8B9P-202ENST00000642028 5216 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 RNU6-1312P-201ENST00000362425 108 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 SNORA71.2-201ENST00000364941 134 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 RNU6-234P-201ENST00000365229 104 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 RNU6-616P-201ENST00000384353 107 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 Y_RNA.509-201ENST00000384506 99 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 Z98742.3-201ENST00000418637 326 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 ATG3P1-201ENST00000419507 911 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 HSPE1P1-201ENST00000421494 318 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 AC016027.5-201ENST00000427227 210 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 FTH1P16-201ENST00000435241 552 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 AC093716.1-201ENST00000435923 377 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 HMGB1P35-201ENST00000503360 598 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 SEC11B-201ENST00000518383 499 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 MIR4286-201ENST00000580651 93 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 AL390838.2-201ENST00000602394 274 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 AC046143.2-201ENST00000609789 160 ntBASIC1.42□□□□□ -2.18
HMCN1Q96RW7 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
HMCN1Q96RW7 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms