Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 HMGN1P28-201ENST00000521340 364 ntBASIC3.3□□□□□ -1.88
PDLIM5Q96HC4 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.3□□□□□ -1.88
PDLIM5Q96HC4 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PDLIM5Q96HC4 AC004024.1-201ENST00000549244 247 ntBASIC3.3□□□□□ -1.88
PDLIM5Q96HC4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.3□□□□□ -1.88
PDLIM5Q96HC4 CYCSP2-201ENST00000558168 301 ntBASIC3.3□□□□□ -1.88
PDLIM5Q96HC4 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.3□□□□□ -1.88
PDLIM5Q96HC4 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.3□□□□□ -1.88
PDLIM5Q96HC4 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.3□□□□□ -1.88
PDLIM5Q96HC4 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.3□□□□□ -1.88
PDLIM5Q96HC4 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.3□□□□□ -1.88
PDLIM5Q96HC4 AL358072.1-201ENST00000604156 575 ntBASIC3.3□□□□□ -1.88
PDLIM5Q96HC4 AC112220.3-201ENST00000605502 502 ntBASIC3.3□□□□□ -1.88
PDLIM5Q96HC4 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.3□□□□□ -1.88
PDLIM5Q96HC4 AC122133.1-201ENST00000613964 233 ntBASIC3.3□□□□□ -1.88
PDLIM5Q96HC4 AL731566.2-201ENST00000618971 317 ntBASIC3.3□□□□□ -1.88
PDLIM5Q96HC4 AL607023.1-201ENST00000620045 248 ntBASIC3.3□□□□□ -1.88
PDLIM5Q96HC4 AC008443.7-201ENST00000622195 246 ntBASIC3.3□□□□□ -1.88
PDLIM5Q96HC4 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.3□□□□□ -1.88
PDLIM5Q96HC4 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PDLIM5Q96HC4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.3□□□□□ -1.88
PDLIM5Q96HC4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 ZNF826P-207ENST00000622273 1910 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 RNU6-553P-201ENST00000364047 96 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 RNU6-805P-201ENST00000365643 106 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 MIR554-201ENST00000384874 96 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 MIR218-2-201ENST00000385006 110 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 RPL23AP29-201ENST00000397284 453 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 EI24P2-201ENST00000397776 1076 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 RPL7L1P10-201ENST00000427790 463 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 RPS25P9-201ENST00000435591 252 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 AC122718.1-201ENST00000439448 744 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 ATP5C1P1-201ENST00000441945 895 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 RPS27AP8-201ENST00000452665 445 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 MTND2P24-201ENST00000453434 806 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 RN7SL542P-201ENST00000467147 294 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 BZW1P2-201ENST00000473537 826 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 MTND3P7-201ENST00000474435 343 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 AC025518.1-201ENST00000479856 347 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 RPL21P13-201ENST00000488305 481 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 RPL30P5-201ENST00000494923 336 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 AC024589.1-201ENST00000512207 263 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 COX6CP8-201ENST00000522620 226 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 DNAJC8P1-201ENST00000554535 372 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 MIR3609-201ENST00000582661 80 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 AL353997.4-201ENST00000586196 166 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 AC006539.2-201ENST00000601729 572 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 AC018714.1-201ENST00000605028 208 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 AC064807.4-201ENST00000607201 407 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 AC009090.3-201ENST00000616553 565 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 AL136981.2-201ENST00000617319 734 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 AC027309.3-201ENST00000623419 351 ntBASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
PDLIM5Q96HC4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 SDAD1P2-201ENST00000441308 2028 ntBASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 RNU6-1078P-201ENST00000364522 103 ntBASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 AL022400.1-201ENST00000423946 935 ntBASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 AC090774.1-201ENST00000435925 246 ntBASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 RPL23AP22-201ENST00000437556 453 ntBASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 ISCA1P2-201ENST00000438679 421 ntBASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 HMGB3P11-201ENST00000440127 604 ntBASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 MTND5P14-201ENST00000441481 1267 ntBASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 AL591503.2-201ENST00000442314 1005 ntBASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 USP9YP10-201ENST00000454868 628 ntBASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 HMGN1P18-201ENST00000457642 277 ntBASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 SNORD121B-201ENST00000458838 81 ntBASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 HSPE1P6-201ENST00000479457 291 ntBASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 AC093663.1-201ENST00000497190 394 ntBASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 AC006445.2-201ENST00000510061 472 ntBASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 AC109464.2-201ENST00000510242 943 ntBASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 AC005476.1-201ENST00000554427 397 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms