Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 MAPK10-266ENST00000641066 6555 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 AL672167.1-206ENST00000356293 943 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 RNA5SP515-201ENST00000364570 118 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 RNU6-1207P-201ENST00000384343 107 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 AL591034.1-201ENST00000407447 340 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 RPS3AP24-201ENST00000407896 734 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 U3.42-201ENST00000408746 214 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 RNU6ATAC-201ENST00000408749 126 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 RNA5SP492-201ENST00000411330 114 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 CYCSP19-201ENST00000411715 316 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 MTND1P21-201ENST00000412991 285 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 AL022400.1-201ENST00000423946 935 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 UBE2D3P2-201ENST00000424409 445 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 SAR1AP4-201ENST00000429225 591 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 AL445584.1-201ENST00000431451 330 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 AC073063.1-201ENST00000434352 607 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 RABEPKP1-201ENST00000440529 1026 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 RPL26P6-201ENST00000440913 438 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 PAXBP1P1-201ENST00000449315 447 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 AL109741.2-201ENST00000455561 343 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 RPL30P9-201ENST00000465586 330 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 AC025518.1-201ENST00000479856 347 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 AC068587.1-201ENST00000483613 781 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 HMGB1P36-201ENST00000487709 576 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 RNU1-95P-201ENST00000516357 160 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 RNU1-128P-201ENST00000516704 160 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 AC087276.1-201ENST00000529659 480 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 AC023538.1-201ENST00000534576 736 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 GTF2IP22-201ENST00000554443 182 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 AC090888.2-201ENST00000559765 1144 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 MIR4697-201ENST00000582977 78 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 DUXAP4-201ENST00000603046 613 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 AC072039.2-201ENST00000608883 439 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 AC079395.3-201ENST00000615161 484 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 AC009464.1-201ENST00000615731 469 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 AC007490.1-201ENST00000624321 703 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 AC009039.2-201ENST00000624524 529 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 AP000676.4-201ENST00000624659 623 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 AC009487.2-201ENST00000420969 6821 ntBASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.52□□□□□ -2.01
RPUSD4Q96CM3 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AL161431.1-201ENST00000618966 4205 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AP000526.1-201ENST00000603308 1388 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 RPL21P132-201ENST00000331267 462 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 RNA5SP119-201ENST00000362715 117 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 RNU6-97P-201ENST00000363387 104 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 RNU6-723P-201ENST00000383973 107 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 SNORA5A-201ENST00000384111 134 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 SNORA57.1-201ENST00000391227 145 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 BX842559.1-201ENST00000419615 532 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AC233728.2-201ENST00000425348 757 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AC091390.1-201ENST00000433904 331 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AC091862.1-201ENST00000438016 1100 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AL008629.1-201ENST00000438615 184 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 RAC1P7-201ENST00000445367 377 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AP000542.1-201ENST00000448473 371 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 RPL23AP35-201ENST00000451906 501 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 RPL7P15-201ENST00000461190 712 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AC104472.2-201ENST00000469035 601 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AP004217.1-201ENST00000480579 346 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AC034222.1-201ENST00000494052 532 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms