Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 U3.39-201ENST00000408569 239 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.1□□□□□ -1.91
RFT1Q96AA3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.1□□□□□ -1.91
RFT1Q96AA3 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.1□□□□□ -1.91
RFT1Q96AA3 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
RFT1Q96AA3 AC012498.1-201ENST00000424037 437 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.1□□□□□ -1.91
RFT1Q96AA3 AL593851.1-201ENST00000426171 157 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.1□□□□□ -1.91
RFT1Q96AA3 RPL23AP69-201ENST00000431134 458 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 UBE2V1P13-201ENST00000436983 439 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.1□□□□□ -1.91
RFT1Q96AA3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.1□□□□□ -1.91
RFT1Q96AA3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.1□□□□□ -1.91
RFT1Q96AA3 MTND2P4-201ENST00000445034 1004 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 AL357552.1-201ENST00000445254 415 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 AL592447.1-201ENST00000447592 540 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.1□□□□□ -1.91
RFT1Q96AA3 TPT1P12-201ENST00000448968 492 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.1□□□□□ -1.91
RFT1Q96AA3 RNU7-125P-201ENST00000458760 62 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.1□□□□□ -1.91
RFT1Q96AA3 OR2A20P-203ENST00000498397 1268 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 KCTD9P5-201ENST00000504141 1170 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RFT1Q96AA3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RFT1Q96AA3 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.1□□□□□ -1.91
RFT1Q96AA3 AL359273.1-201ENST00000510918 627 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.1□□□□□ -1.91
RFT1Q96AA3 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RFT1Q96AA3 RNU6-759P-201ENST00000516740 103 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 RNU6-678P-201ENST00000516832 109 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 RNU6-579P-201ENST00000516879 102 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 MIR2276-201ENST00000516886 89 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.1□□□□□ -1.91
RFT1Q96AA3 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.1□□□□□ -1.91
RFT1Q96AA3 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.1□□□□□ -1.91
RFT1Q96AA3 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.1□□□□□ -1.91
RFT1Q96AA3 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.1□□□□□ -1.91
RFT1Q96AA3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.1□□□□□ -1.91
RFT1Q96AA3 RN7SL703P-201ENST00000578485 302 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 ZNF415P1-201ENST00000582279 1166 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 AP001004.1-201ENST00000582468 324 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 AC053481.4-201ENST00000583164 216 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.1□□□□□ -1.91
RFT1Q96AA3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.1□□□□□ -1.91
RFT1Q96AA3 AC121247.2-201ENST00000604776 136 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 AC004067.1-201ENST00000608733 700 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 AC009570.1-201ENST00000609599 745 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 AP000254.1-201ENST00000609934 520 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 AC008443.7-201ENST00000622195 246 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 RNA5SP196-201ENST00000625967 102 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.1□□□□□ -1.91
RFT1Q96AA3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RFT1Q96AA3 SDAD1P2-201ENST00000441308 2028 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 AC006378.2-201ENST00000623178 2476 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 AC005832.2-201ENST00000538921 1430 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
RFT1Q96AA3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RFT1Q96AA3 AC004972.1-201ENST00000623934 2209 ntBASIC3.09□□□□□ -1.91
RFT1Q96AA3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.09□□□□□ -1.91
RFT1Q96AA3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.09□□□□□ -1.91
RFT1Q96AA3 RNU6-500P-201ENST00000362349 107 ntBASIC3.09□□□□□ -1.91
RFT1Q96AA3 SNORD56.3-201ENST00000363507 71 ntBASIC3.09□□□□□ -1.91
RFT1Q96AA3 SNORA36C-201ENST00000384289 132 ntBASIC3.09□□□□□ -1.91
RFT1Q96AA3 RNU5A-2P-201ENST00000384337 116 ntBASIC3.09□□□□□ -1.91
RFT1Q96AA3 MIR493-201ENST00000385254 89 ntBASIC3.09□□□□□ -1.91
RFT1Q96AA3 RNU6-754P-201ENST00000391166 107 ntBASIC3.09□□□□□ -1.91
RFT1Q96AA3 MIR1290-201ENST00000408735 78 ntBASIC3.09□□□□□ -1.91
RFT1Q96AA3 HMGB1P11-201ENST00000413899 637 ntBASIC3.09□□□□□ -1.91
RFT1Q96AA3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.09□□□□□ -1.91
RFT1Q96AA3 RSL24D1P6-201ENST00000426934 401 ntBASIC3.09□□□□□ -1.91
RFT1Q96AA3 OR2B8P-201ENST00000432841 938 ntBASIC3.09□□□□□ -1.91
RFT1Q96AA3 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.09□□□□□ -1.91
RFT1Q96AA3 AC118469.1-201ENST00000442943 488 ntBASIC3.09□□□□□ -1.91
RFT1Q96AA3 KATNBL1P3-201ENST00000443475 909 ntBASIC3.09□□□□□ -1.91
RFT1Q96AA3 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.09□□□□□ -1.91
RFT1Q96AA3 AL359385.1-201ENST00000456509 365 ntBASIC3.09□□□□□ -1.91
RFT1Q96AA3 OR6K1P-201ENST00000456766 971 ntBASIC3.09□□□□□ -1.91
RFT1Q96AA3 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.09□□□□□ -1.91
RFT1Q96AA3 HSPE1P6-201ENST00000479457 291 ntBASIC3.09□□□□□ -1.91
RFT1Q96AA3 AC021678.1-201ENST00000505195 936 ntBASIC3.09□□□□□ -1.91
RFT1Q96AA3 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RFT1Q96AA3 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.09□□□□□ -1.91
RFT1Q96AA3 AC117532.1-201ENST00000514638 323 ntBASIC3.09□□□□□ -1.91
RFT1Q96AA3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.09□□□□□ -1.91
RFT1Q96AA3 SNORA70.19-201ENST00000516717 90 ntBASIC3.09□□□□□ -1.91
RFT1Q96AA3 MIR2116-201ENST00000517221 80 ntBASIC3.09□□□□□ -1.91
RFT1Q96AA3 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.09□□□□□ -1.91
RFT1Q96AA3 AC104027.1-201ENST00000521887 300 ntBASIC3.09□□□□□ -1.91
RFT1Q96AA3 AC026333.2-201ENST00000542164 106 ntBASIC3.09□□□□□ -1.91
RFT1Q96AA3 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.09□□□□□ -1.91
RFT1Q96AA3 MTCYBP33-201ENST00000575007 1130 ntBASIC3.09□□□□□ -1.91
RFT1Q96AA3 MIR4286-201ENST00000580651 93 ntBASIC3.09□□□□□ -1.91
RFT1Q96AA3 BNIP3P23-201ENST00000599655 511 ntBASIC3.09□□□□□ -1.91
RFT1Q96AA3 AC112187.2-201ENST00000604345 283 ntBASIC3.09□□□□□ -1.91
RFT1Q96AA3 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.09□□□□□ -1.91
RFT1Q96AA3 AC024941.1-201ENST00000612250 334 ntBASIC3.09□□□□□ -1.91
RFT1Q96AA3 AC004223.4-201ENST00000612426 332 ntBASIC3.09□□□□□ -1.91
RFT1Q96AA3 AC068831.7-201ENST00000616954 363 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 160.2 ms