Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 Y_RNA.303-201ENST00000364998 94 ntBASIC4.88□□□□□ -1.63
RTF1Q92541 RNU6-359P-201ENST00000365466 108 ntBASIC4.88□□□□□ -1.63
RTF1Q92541 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RTF1Q92541 SOD2P1-201ENST00000396543 562 ntBASIC4.88□□□□□ -1.63
RTF1Q92541 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RTF1Q92541 MTCYBP45-201ENST00000435243 565 ntBASIC4.88□□□□□ -1.63
RTF1Q92541 AC108734.1-201ENST00000439549 399 ntBASIC4.88□□□□□ -1.63
RTF1Q92541 AL662791.1-201ENST00000441992 928 ntBASIC4.88□□□□□ -1.63
RTF1Q92541 RPS3AP46-201ENST00000448352 682 ntBASIC4.88□□□□□ -1.63
RTF1Q92541 RPL23AP41-201ENST00000484754 458 ntBASIC4.88□□□□□ -1.63
RTF1Q92541 RPS26P15-201ENST00000488067 348 ntBASIC4.88□□□□□ -1.63
RTF1Q92541 AC104619.4-201ENST00000510773 249 ntBASIC4.88□□□□□ -1.63
RTF1Q92541 Vault.3-201ENST00000516676 95 ntBASIC4.88□□□□□ -1.63
RTF1Q92541 AC109635.3-201ENST00000529536 185 ntBASIC4.88□□□□□ -1.63
RTF1Q92541 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.88□□□□□ -1.63
RTF1Q92541 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.88□□□□□ -1.63
RTF1Q92541 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.88□□□□□ -1.63
RTF1Q92541 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.88□□□□□ -1.63
RTF1Q92541 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.88□□□□□ -1.63
RTF1Q92541 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.88□□□□□ -1.63
RTF1Q92541 AL365503.1-201ENST00000605247 905 ntBASIC4.88□□□□□ -1.63
RTF1Q92541 DUXAP9-208ENST00000622815 614 ntBASIC4.88□□□□□ -1.63
RTF1Q92541 AC009093.8-201ENST00000641769 292 ntBASIC4.88□□□□□ -1.63
RTF1Q92541 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RTF1Q92541 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.88□□□□□ -1.63
RTF1Q92541 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RTF1Q92541 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RTF1Q92541 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RTF1Q92541 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RTF1Q92541 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
RTF1Q92541 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RTF1Q92541 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
RTF1Q92541 RNU6-1279P-201ENST00000383917 103 ntBASIC4.87□□□□□ -1.63
RTF1Q92541 HLFP1-201ENST00000402375 499 ntBASIC4.87□□□□□ -1.63
RTF1Q92541 RPS3AP24-201ENST00000407896 734 ntBASIC4.87□□□□□ -1.63
RTF1Q92541 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.87□□□□□ -1.63
RTF1Q92541 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.87□□□□□ -1.63
RTF1Q92541 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.87□□□□□ -1.63
RTF1Q92541 EZH2P1-201ENST00000431167 291 ntBASIC4.87□□□□□ -1.63
RTF1Q92541 AC104850.1-201ENST00000435940 476 ntBASIC4.87□□□□□ -1.63
RTF1Q92541 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.87□□□□□ -1.63
RTF1Q92541 AL049734.2-201ENST00000441066 616 ntBASIC4.87□□□□□ -1.63
RTF1Q92541 NFU1P2-201ENST00000448700 469 ntBASIC4.87□□□□□ -1.63
RTF1Q92541 RPL7P52-201ENST00000449200 742 ntBASIC4.87□□□□□ -1.63
RTF1Q92541 MTND1P12-201ENST00000455231 147 ntBASIC4.87□□□□□ -1.63
RTF1Q92541 HMGB1P21-201ENST00000502313 581 ntBASIC4.87□□□□□ -1.63
RTF1Q92541 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.87□□□□□ -1.63
RTF1Q92541 SUMO2P20-201ENST00000520803 283 ntBASIC4.87□□□□□ -1.63
RTF1Q92541 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RTF1Q92541 AK6P1-201ENST00000540219 478 ntBASIC4.87□□□□□ -1.63
RTF1Q92541 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.87□□□□□ -1.63
RTF1Q92541 AC123904.2-201ENST00000548059 300 ntBASIC4.87□□□□□ -1.63
RTF1Q92541 SETP2-201ENST00000553886 926 ntBASIC4.87□□□□□ -1.63
RTF1Q92541 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.87□□□□□ -1.63
RTF1Q92541 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.87□□□□□ -1.63
RTF1Q92541 AC068790.5-201ENST00000602741 355 ntBASIC4.87□□□□□ -1.63
RTF1Q92541 MIR4727-201ENST00000622232 55 ntBASIC4.87□□□□□ -1.63
RTF1Q92541 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.87□□□□□ -1.63
RTF1Q92541 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
RTF1Q92541 AC007390.2-201ENST00000606229 3803 ntBASIC4.87□□□□□ -1.63
RTF1Q92541 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RTF1Q92541 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RTF1Q92541 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RTF1Q92541 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RTF1Q92541 AC007685.1-201ENST00000329806 452 ntBASIC4.86□□□□□ -1.63
RTF1Q92541 RNU6-1207P-201ENST00000384343 107 ntBASIC4.86□□□□□ -1.63
RTF1Q92541 RNU6-114P-201ENST00000384704 105 ntBASIC4.86□□□□□ -1.63
RTF1Q92541 AC127391.1-201ENST00000411737 98 ntBASIC4.86□□□□□ -1.63
RTF1Q92541 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.86□□□□□ -1.63
RTF1Q92541 CCDC58P2-201ENST00000417131 366 ntBASIC4.86□□□□□ -1.63
RTF1Q92541 MTCO2P19-201ENST00000427513 598 ntBASIC4.86□□□□□ -1.63
RTF1Q92541 ELOCP14-201ENST00000428070 331 ntBASIC4.86□□□□□ -1.63
RTF1Q92541 HSPD1P21-201ENST00000436541 245 ntBASIC4.86□□□□□ -1.63
RTF1Q92541 ELOCP7-201ENST00000439968 331 ntBASIC4.86□□□□□ -1.63
RTF1Q92541 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.86□□□□□ -1.63
RTF1Q92541 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.86□□□□□ -1.63
RTF1Q92541 RPL7L1P8-201ENST00000469911 741 ntBASIC4.86□□□□□ -1.63
RTF1Q92541 AC106707.2-201ENST00000484182 374 ntBASIC4.86□□□□□ -1.63
RTF1Q92541 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.86□□□□□ -1.63
RTF1Q92541 VWA8P1-201ENST00000510889 176 ntBASIC4.86□□□□□ -1.63
RTF1Q92541 AC105914.1-201ENST00000511798 226 ntBASIC4.86□□□□□ -1.63
RTF1Q92541 AC022790.1-201ENST00000522872 204 ntBASIC4.86□□□□□ -1.63
RTF1Q92541 IGKV2D-19-201ENST00000523346 262 ntBASIC4.86□□□□□ -1.63
RTF1Q92541 AC024224.1-201ENST00000538284 609 ntBASIC4.86□□□□□ -1.63
RTF1Q92541 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.86□□□□□ -1.63
RTF1Q92541 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.86□□□□□ -1.63
RTF1Q92541 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.86□□□□□ -1.63
RTF1Q92541 AC091135.1-201ENST00000585943 307 ntBASIC4.86□□□□□ -1.63
RTF1Q92541 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.86□□□□□ -1.63
RTF1Q92541 AC024220.1-201ENST00000603675 484 ntBASIC4.86□□□□□ -1.63
RTF1Q92541 AC113194.1-201ENST00000606037 500 ntBASIC4.86□□□□□ -1.63
RTF1Q92541 MIR98-201ENST00000606724 119 ntBASIC4.86□□□□□ -1.63
RTF1Q92541 AL133173.2-201ENST00000614270 90 ntBASIC4.86□□□□□ -1.63
RTF1Q92541 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.86□□□□□ -1.63
RTF1Q92541 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.86□□□□□ -1.63
RTF1Q92541 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.86□□□□□ -1.63
RTF1Q92541 AC092794.2-201ENST00000620933 563 ntBASIC4.86□□□□□ -1.63
RTF1Q92541 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.86□□□□□ -1.63
RTF1Q92541 MIR1321-201ENST00000637766 79 ntBASIC4.86□□□□□ -1.63
RTF1Q92541 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms