Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 TPMTP1-201ENST00000592307 737 ntBASIC4.04□□□□□ -1.76
USP38Q8NB14 AL451007.1-201ENST00000595491 289 ntBASIC4.04□□□□□ -1.76
USP38Q8NB14 BCRP9-201ENST00000605312 388 ntBASIC4.04□□□□□ -1.76
USP38Q8NB14 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.04□□□□□ -1.76
USP38Q8NB14 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.04□□□□□ -1.76
USP38Q8NB14 AC048347.1-201ENST00000624621 427 ntBASIC4.04□□□□□ -1.76
USP38Q8NB14 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
USP38Q8NB14 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.04□□□□□ -1.76
USP38Q8NB14 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
USP38Q8NB14 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
USP38Q8NB14 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
USP38Q8NB14 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
USP38Q8NB14 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
USP38Q8NB14 AL365440.1-201ENST00000436135 2167 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.03□□□□□ -1.76
USP38Q8NB14 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
USP38Q8NB14 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
USP38Q8NB14 AP001486.2-201ENST00000561652 5113 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
USP38Q8NB14 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
USP38Q8NB14 RNU6-600P-201ENST00000362524 99 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 RNA5SP374-201ENST00000362939 125 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 U3.4-201ENST00000363352 213 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 RNA5SP189-201ENST00000364920 115 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 SNORD116-9-201ENST00000384000 95 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 SNORD116-3-201ENST00000384287 95 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 SNORD116-7-201ENST00000384404 95 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 SNORD116-5-201ENST00000384462 95 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 SOD2P1-201ENST00000396543 562 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 AL391417.1-201ENST00000404100 426 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 AL359704.1-201ENST00000411586 781 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 EI24P1-201ENST00000416584 867 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.03□□□□□ -1.76
USP38Q8NB14 SEPT2P1-201ENST00000419651 180 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 AC245054.1-201ENST00000420944 258 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.03□□□□□ -1.76
USP38Q8NB14 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.03□□□□□ -1.76
USP38Q8NB14 AC079780.1-201ENST00000428259 207 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 AC244035.1-201ENST00000430042 390 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 OR4K11P-201ENST00000431829 904 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 UBE2V1P13-201ENST00000436983 439 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 MTND4P32-201ENST00000437189 1237 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 THAP5P1-201ENST00000439089 262 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.03□□□□□ -1.76
USP38Q8NB14 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.03□□□□□ -1.76
USP38Q8NB14 GDI2P2-201ENST00000445131 608 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.03□□□□□ -1.76
USP38Q8NB14 AP000936.2-201ENST00000447151 681 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 SNRPGP9-201ENST00000456025 225 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.03□□□□□ -1.76
USP38Q8NB14 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.03□□□□□ -1.76
USP38Q8NB14 AP000797.1-201ENST00000478870 387 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.03□□□□□ -1.76
USP38Q8NB14 RPL23AP55-201ENST00000498163 452 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 AC078918.1-201ENST00000498515 228 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 RNU2-27P-201ENST00000516185 142 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 RNU6-1073P-201ENST00000517182 106 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 AC103843.2-201ENST00000530523 682 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 AC109635.4-202ENST00000531666 412 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.03□□□□□ -1.76
USP38Q8NB14 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 AP000403.1-201ENST00000603349 851 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 AL365503.1-201ENST00000605247 905 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.03□□□□□ -1.76
USP38Q8NB14 AC079684.1-201ENST00000621405 437 ntBASIC4.03□□□□□ -1.76
USP38Q8NB14 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.03□□□□□ -1.76
USP38Q8NB14 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
USP38Q8NB14 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
USP38Q8NB14 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
USP38Q8NB14 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.02□□□□□ -1.77
USP38Q8NB14 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.02□□□□□ -1.77
USP38Q8NB14 SNORD9-201ENST00000362566 104 ntBASIC4.02□□□□□ -1.77
USP38Q8NB14 RNU6-114P-201ENST00000384704 105 ntBASIC4.02□□□□□ -1.77
USP38Q8NB14 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
USP38Q8NB14 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.02□□□□□ -1.77
USP38Q8NB14 TRIM60P18-201ENST00000441518 828 ntBASIC4.02□□□□□ -1.77
USP38Q8NB14 RBMY2UP-201ENST00000453474 324 ntBASIC4.02□□□□□ -1.77
USP38Q8NB14 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.02□□□□□ -1.77
USP38Q8NB14 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.02□□□□□ -1.77
USP38Q8NB14 AL049830.2-201ENST00000480072 201 ntBASIC4.02□□□□□ -1.77
USP38Q8NB14 MLLT10P2-201ENST00000506434 249 ntBASIC4.02□□□□□ -1.77
USP38Q8NB14 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.02□□□□□ -1.77
USP38Q8NB14 AC021146.1-201ENST00000511202 716 ntBASIC4.02□□□□□ -1.77
USP38Q8NB14 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.02□□□□□ -1.77
USP38Q8NB14 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.02□□□□□ -1.77
USP38Q8NB14 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.02□□□□□ -1.77
USP38Q8NB14 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.02□□□□□ -1.77
USP38Q8NB14 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.02□□□□□ -1.77
USP38Q8NB14 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.02□□□□□ -1.77
USP38Q8NB14 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.02□□□□□ -1.77
USP38Q8NB14 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.02□□□□□ -1.77
USP38Q8NB14 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.02□□□□□ -1.77
USP38Q8NB14 AC060771.1-201ENST00000582031 164 ntBASIC4.02□□□□□ -1.77
USP38Q8NB14 AC083760.1-201ENST00000589621 670 ntBASIC4.02□□□□□ -1.77
USP38Q8NB14 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
USP38Q8NB14 AC239868.4-201ENST00000608318 671 ntBASIC4.02□□□□□ -1.77
USP38Q8NB14 AC013412.1-201ENST00000610687 192 ntBASIC4.02□□□□□ -1.77
USP38Q8NB14 U6.98-201ENST00000637157 84 ntBASIC4.02□□□□□ -1.77
USP38Q8NB14 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
USP38Q8NB14 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms