Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDH20Q8N6Y1 AC104308.1-201ENST00000454621 333 ntBASIC3.59□□□□□ -1.83
PCDH20Q8N6Y1 RN7SL330P-201ENST00000469709 307 ntBASIC3.59□□□□□ -1.83
PCDH20Q8N6Y1 RN7SL293P-201ENST00000481765 281 ntBASIC3.59□□□□□ -1.83
PCDH20Q8N6Y1 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDH20Q8N6Y1 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PCDH20Q8N6Y1 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PCDH20Q8N6Y1 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.59□□□□□ -1.83
PCDH20Q8N6Y1 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.59□□□□□ -1.83
PCDH20Q8N6Y1 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PCDH20Q8N6Y1 AC022878.1-201ENST00000530684 149 ntBASIC3.59□□□□□ -1.83
PCDH20Q8N6Y1 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PCDH20Q8N6Y1 AP002453.2-201ENST00000533503 320 ntBASIC3.59□□□□□ -1.83
PCDH20Q8N6Y1 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDH20Q8N6Y1 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDH20Q8N6Y1 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.59□□□□□ -1.83
PCDH20Q8N6Y1 AGGF1P4-201ENST00000568249 801 ntBASIC3.59□□□□□ -1.83
PCDH20Q8N6Y1 MIR3186-201ENST00000577404 85 ntBASIC3.59□□□□□ -1.83
PCDH20Q8N6Y1 AC112191.3-201ENST00000604371 277 ntBASIC3.59□□□□□ -1.83
PCDH20Q8N6Y1 AC138749.5-201ENST00000611461 208 ntBASIC3.59□□□□□ -1.83
PCDH20Q8N6Y1 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PCDH20Q8N6Y1 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDH20Q8N6Y1 AC116165.2-201ENST00000616705 206 ntBASIC3.59□□□□□ -1.83
PCDH20Q8N6Y1 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDH20Q8N6Y1 AL357559.1-201ENST00000622228 274 ntBASIC3.59□□□□□ -1.83
PCDH20Q8N6Y1 AC098679.4-201ENST00000624241 654 ntBASIC3.59□□□□□ -1.83
PCDH20Q8N6Y1 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDH20Q8N6Y1 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
PCDH20Q8N6Y1 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PCDH20Q8N6Y1 MFSD8-233ENST00000641482 4860 ntBASIC3.59□□□□□ -1.84
PCDH20Q8N6Y1 TEX21P-201ENST00000447107 1476 ntBASIC3.59□□□□□ -1.84
PCDH20Q8N6Y1 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PCDH20Q8N6Y1 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PCDH20Q8N6Y1 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 AC007656.2-201ENST00000624902 4547 ntBASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 RNU6-1249P-201ENST00000363237 111 ntBASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 RNA5SP42-201ENST00000364278 115 ntBASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 Y_RNA.359-201ENST00000365498 102 ntBASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 RNU6-1119P-201ENST00000384349 108 ntBASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 Y_RNA.548-201ENST00000384656 105 ntBASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 AL583834.1-201ENST00000406943 343 ntBASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 Y_RNA.608-201ENST00000410647 95 ntBASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 RN7SKP53-201ENST00000411337 315 ntBASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 CRYBB2P1-203ENST00000415709 538 ntBASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 RPS7P15-201ENST00000415804 584 ntBASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 DBIP2-201ENST00000419076 262 ntBASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 ATP5JP1-201ENST00000431631 322 ntBASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 HMGN2P21-201ENST00000447764 270 ntBASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 AP1S2P1-201ENST00000457344 379 ntBASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 AC034236.1-201ENST00000469891 373 ntBASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 RN7SL594P-201ENST00000470590 287 ntBASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 AC078817.1-201ENST00000492623 435 ntBASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 RNU2-27P-201ENST00000516185 142 ntBASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 AP003497.1-201ENST00000528472 562 ntBASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 ZNF519P3-201ENST00000557158 1032 ntBASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 AC034268.2-201ENST00000571784 482 ntBASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 AC090616.5-202ENST00000582111 297 ntBASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 BNIP3P8-201ENST00000597863 560 ntBASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 SEPT7P9-203ENST00000604116 343 ntBASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 AL139286.2-201ENST00000606838 396 ntBASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 AC090425.2-201ENST00000608818 501 ntBASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 AC104073.3-201ENST00000610942 955 ntBASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 AL592295.2-201ENST00000612578 206 ntBASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 AL590099.1-201ENST00000615276 138 ntBASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 AC244517.1-201ENST00000606030 2086 ntBASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.58□□□□□ -1.84
PCDH20Q8N6Y1 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
PCDH20Q8N6Y1 Y_RNA.46-201ENST00000362695 102 ntBASIC3.57□□□□□ -1.84
PCDH20Q8N6Y1 MIR183-201ENST00000384958 110 ntBASIC3.57□□□□□ -1.84
PCDH20Q8N6Y1 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
PCDH20Q8N6Y1 SNORD115.1-201ENST00000391109 76 ntBASIC3.57□□□□□ -1.84
PCDH20Q8N6Y1 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.57□□□□□ -1.84
PCDH20Q8N6Y1 RPS20P2-201ENST00000402520 389 ntBASIC3.57□□□□□ -1.84
PCDH20Q8N6Y1 MTCO3P41-201ENST00000414801 328 ntBASIC3.57□□□□□ -1.84
PCDH20Q8N6Y1 AC093578.1-201ENST00000415219 368 ntBASIC3.57□□□□□ -1.84
PCDH20Q8N6Y1 MTND4LP10-201ENST00000435146 291 ntBASIC3.57□□□□□ -1.84
PCDH20Q8N6Y1 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.57□□□□□ -1.84
PCDH20Q8N6Y1 CYCSP43-201ENST00000438233 310 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms