Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.83□□□□□ -1.96
C9orf40Q8IXQ3 RPL27AP5-201ENST00000469428 449 ntBASIC2.83□□□□□ -1.96
C9orf40Q8IXQ3 RPL7P5-201ENST00000471472 736 ntBASIC2.83□□□□□ -1.96
C9orf40Q8IXQ3 RPS4XP13-201ENST00000483219 789 ntBASIC2.83□□□□□ -1.96
C9orf40Q8IXQ3 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.83□□□□□ -1.96
C9orf40Q8IXQ3 AC024589.1-201ENST00000512207 263 ntBASIC2.83□□□□□ -1.96
C9orf40Q8IXQ3 AC010265.1-201ENST00000513509 211 ntBASIC2.83□□□□□ -1.96
C9orf40Q8IXQ3 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.83□□□□□ -1.96
C9orf40Q8IXQ3 RNA5SP216-201ENST00000516111 123 ntBASIC2.83□□□□□ -1.96
C9orf40Q8IXQ3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.83□□□□□ -1.96
C9orf40Q8IXQ3 PSMA2P1-201ENST00000526365 646 ntBASIC2.83□□□□□ -1.96
C9orf40Q8IXQ3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.83□□□□□ -1.96
C9orf40Q8IXQ3 AC011468.4-201ENST00000603942 409 ntBASIC2.83□□□□□ -1.96
C9orf40Q8IXQ3 RNU6-88P-201ENST00000606801 100 ntBASIC2.83□□□□□ -1.96
C9orf40Q8IXQ3 AC091953.5-201ENST00000622919 233 ntBASIC2.83□□□□□ -1.96
C9orf40Q8IXQ3 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
C9orf40Q8IXQ3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
C9orf40Q8IXQ3 AC104454.1-201ENST00000421341 1401 ntBASIC2.83□□□□□ -1.96
C9orf40Q8IXQ3 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
C9orf40Q8IXQ3 AC087359.1-201ENST00000508335 1740 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 AL161781.1-201ENST00000354277 403 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 RNU6-777P-201ENST00000364265 104 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 Y_RNA.234-201ENST00000364409 97 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 SNORA51.4-201ENST00000364993 124 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 TAS2R15P-201ENST00000390674 928 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 SNORA48.5-201ENST00000391143 135 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 RPL21P3-201ENST00000395517 478 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 AC119751.3-201ENST00000399720 670 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 MTND4P13-201ENST00000402078 1023 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 RN7SKP220-201ENST00000410611 288 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 AL035407.1-201ENST00000429211 571 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 HMGB1P12-201ENST00000438594 598 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 AL008629.1-201ENST00000438615 184 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 PAXBP1P1-201ENST00000449315 447 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 AC146507.2-201ENST00000460608 476 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 RN7SL20P-201ENST00000488827 297 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 AC093278.1-201ENST00000494700 600 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 AC118282.1-201ENST00000506408 765 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 SNRPGP16-201ENST00000533275 226 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 LRRC34P1-201ENST00000542742 915 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 ZNF192P1-203ENST00000565888 810 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 FAM60BP-201ENST00000578364 658 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 MIR4999-201ENST00000585029 91 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 AL353997.4-201ENST00000586196 166 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 VN1R92P-201ENST00000598511 928 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 AC090186.1-201ENST00000605991 572 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 TUG1_1.1-201ENST00000610654 145 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 AL162274.2-201ENST00000614406 332 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 AL590099.1-201ENST00000615276 138 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 AL355493.4-201ENST00000618530 292 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 AP002791.1-201ENST00000623291 381 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 AL355596.1-201ENST00000565399 3996 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 SGO1P2-201ENST00000429458 1589 ntBASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.82□□□□□ -1.96
C9orf40Q8IXQ3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 SNORA71.1-201ENST00000364523 117 ntBASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 RNU6-1200P-201ENST00000384162 107 ntBASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 RNU6-253P-201ENST00000384730 105 ntBASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 MIR128-1-201ENST00000384921 82 ntBASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 MIR483-201ENST00000385070 76 ntBASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 AL138885.1-201ENST00000405921 675 ntBASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 RNA5SP129-201ENST00000410276 118 ntBASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 BEND7P1-201ENST00000422058 457 ntBASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 AL117351.1-201ENST00000438864 766 ntBASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 AL662791.1-201ENST00000441992 928 ntBASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms