Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HERC6Q8IVU3 SNORD115.1-201ENST00000391109 76 ntBASIC3.98□□□□□ -1.77
HERC6Q8IVU3 RNU6-754P-201ENST00000391166 107 ntBASIC3.98□□□□□ -1.77
HERC6Q8IVU3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.98□□□□□ -1.77
HERC6Q8IVU3 RNA5SP129-201ENST00000410276 118 ntBASIC3.98□□□□□ -1.77
HERC6Q8IVU3 RNU2-37P-201ENST00000410695 177 ntBASIC3.98□□□□□ -1.77
HERC6Q8IVU3 AC005019.1-201ENST00000436455 431 ntBASIC3.98□□□□□ -1.77
HERC6Q8IVU3 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HERC6Q8IVU3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.98□□□□□ -1.77
HERC6Q8IVU3 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.98□□□□□ -1.77
HERC6Q8IVU3 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.98□□□□□ -1.77
HERC6Q8IVU3 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.98□□□□□ -1.77
HERC6Q8IVU3 RNU2-27P-201ENST00000516185 142 ntBASIC3.98□□□□□ -1.77
HERC6Q8IVU3 SNORA31.8-201ENST00000516327 108 ntBASIC3.98□□□□□ -1.77
HERC6Q8IVU3 RNA5SP309-201ENST00000516670 106 ntBASIC3.98□□□□□ -1.77
HERC6Q8IVU3 RNA5SP468-201ENST00000516782 93 ntBASIC3.98□□□□□ -1.77
HERC6Q8IVU3 RNU6-798P-201ENST00000516912 103 ntBASIC3.98□□□□□ -1.77
HERC6Q8IVU3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.98□□□□□ -1.77
HERC6Q8IVU3 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.98□□□□□ -1.77
HERC6Q8IVU3 AC022878.1-201ENST00000530684 149 ntBASIC3.98□□□□□ -1.77
HERC6Q8IVU3 RFPL1S-203ENST00000539579 330 ntBASIC3.98□□□□□ -1.77
HERC6Q8IVU3 AC135279.1-201ENST00000543493 504 ntBASIC3.98□□□□□ -1.77
HERC6Q8IVU3 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.98□□□□□ -1.77
HERC6Q8IVU3 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.98□□□□□ -1.77
HERC6Q8IVU3 MIR5697-201ENST00000578045 78 ntBASIC3.98□□□□□ -1.77
HERC6Q8IVU3 COX6CP3-201ENST00000580869 223 ntBASIC3.98□□□□□ -1.77
HERC6Q8IVU3 MIR4513-201ENST00000581077 86 ntBASIC3.98□□□□□ -1.77
HERC6Q8IVU3 AC006116.10-201ENST00000591836 581 ntBASIC3.98□□□□□ -1.77
HERC6Q8IVU3 AP001981.2-201ENST00000603241 418 ntBASIC3.98□□□□□ -1.77
HERC6Q8IVU3 AL137849.1-201ENST00000604767 169 ntBASIC3.98□□□□□ -1.77
HERC6Q8IVU3 AL451064.1-201ENST00000607718 471 ntBASIC3.98□□□□□ -1.77
HERC6Q8IVU3 MIR7851-201ENST00000610611 160 ntBASIC3.98□□□□□ -1.77
HERC6Q8IVU3 AC009878.1-201ENST00000621819 340 ntBASIC3.98□□□□□ -1.77
HERC6Q8IVU3 AL353748.2-201ENST00000622148 471 ntBASIC3.98□□□□□ -1.77
HERC6Q8IVU3 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.98□□□□□ -1.77
HERC6Q8IVU3 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.98□□□□□ -1.77
HERC6Q8IVU3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
HERC6Q8IVU3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.98□□□□□ -1.77
HERC6Q8IVU3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.98□□□□□ -1.77
HERC6Q8IVU3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HERC6Q8IVU3 AL133383.2-201ENST00000622958 2336 ntBASIC3.98□□□□□ -1.77
HERC6Q8IVU3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
HERC6Q8IVU3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
HERC6Q8IVU3 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HERC6Q8IVU3 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HERC6Q8IVU3 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HERC6Q8IVU3 GNG5P1-201ENST00000255500 204 ntBASIC3.97□□□□□ -1.77
HERC6Q8IVU3 FGF7P2-201ENST00000332473 296 ntBASIC3.97□□□□□ -1.77
HERC6Q8IVU3 Y_RNA.46-201ENST00000362695 102 ntBASIC3.97□□□□□ -1.77
HERC6Q8IVU3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
HERC6Q8IVU3 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.97□□□□□ -1.77
HERC6Q8IVU3 RNU4-65P-201ENST00000410473 140 ntBASIC3.97□□□□□ -1.77
HERC6Q8IVU3 SSXP9-201ENST00000417503 292 ntBASIC3.97□□□□□ -1.77
HERC6Q8IVU3 AC245054.1-201ENST00000420944 258 ntBASIC3.97□□□□□ -1.77
HERC6Q8IVU3 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.97□□□□□ -1.77
HERC6Q8IVU3 AC087650.1-201ENST00000431445 468 ntBASIC3.97□□□□□ -1.77
HERC6Q8IVU3 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.97□□□□□ -1.77
HERC6Q8IVU3 HMGB1P12-201ENST00000438594 598 ntBASIC3.97□□□□□ -1.77
HERC6Q8IVU3 MTND4LP3-201ENST00000468320 276 ntBASIC3.97□□□□□ -1.77
HERC6Q8IVU3 RPS4XP13-201ENST00000483219 789 ntBASIC3.97□□□□□ -1.77
HERC6Q8IVU3 RPL7P24-201ENST00000493052 752 ntBASIC3.97□□□□□ -1.77
HERC6Q8IVU3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.97□□□□□ -1.77
HERC6Q8IVU3 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.97□□□□□ -1.77
HERC6Q8IVU3 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.97□□□□□ -1.77
HERC6Q8IVU3 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.97□□□□□ -1.77
HERC6Q8IVU3 RN7SKP244-201ENST00000516513 307 ntBASIC3.97□□□□□ -1.77
HERC6Q8IVU3 RN7SKP289-201ENST00000517244 295 ntBASIC3.97□□□□□ -1.77
HERC6Q8IVU3 AC090136.1-201ENST00000520009 240 ntBASIC3.97□□□□□ -1.77
HERC6Q8IVU3 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HERC6Q8IVU3 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.97□□□□□ -1.77
HERC6Q8IVU3 AP000873.5-201ENST00000533906 236 ntBASIC3.97□□□□□ -1.77
HERC6Q8IVU3 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.97□□□□□ -1.77
HERC6Q8IVU3 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.97□□□□□ -1.77
HERC6Q8IVU3 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.97□□□□□ -1.77
HERC6Q8IVU3 AP001029.3-201ENST00000588063 596 ntBASIC3.97□□□□□ -1.77
HERC6Q8IVU3 BNIP3P8-201ENST00000597863 560 ntBASIC3.97□□□□□ -1.77
HERC6Q8IVU3 AP001330.4-201ENST00000604350 154 ntBASIC3.97□□□□□ -1.77
HERC6Q8IVU3 AL034351.1-201ENST00000605288 668 ntBASIC3.97□□□□□ -1.77
HERC6Q8IVU3 AC084782.3-201ENST00000612282 578 ntBASIC3.97□□□□□ -1.77
HERC6Q8IVU3 AC090970.3-201ENST00000612566 866 ntBASIC3.97□□□□□ -1.77
HERC6Q8IVU3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.97□□□□□ -1.77
HERC6Q8IVU3 AC025594.3-201ENST00000613068 790 ntBASIC3.97□□□□□ -1.77
HERC6Q8IVU3 AC068137.4-201ENST00000638485 296 ntBASIC3.97□□□□□ -1.77
HERC6Q8IVU3 IPO8P1-201ENST00000455509 3109 ntBASIC3.97□□□□□ -1.77
HERC6Q8IVU3 HSPA8P1-201ENST00000425843 1833 ntBASIC3.97□□□□□ -1.77
HERC6Q8IVU3 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.97□□□□□ -1.77
HERC6Q8IVU3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
HERC6Q8IVU3 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
HERC6Q8IVU3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
HERC6Q8IVU3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.96□□□□□ -1.77
HERC6Q8IVU3 AC021755.1-201ENST00000559747 1447 ntBASIC3.96□□□□□ -1.77
HERC6Q8IVU3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
HERC6Q8IVU3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.96□□□□□ -1.78
HERC6Q8IVU3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
HERC6Q8IVU3 Y_RNA.548-201ENST00000384656 105 ntBASIC3.96□□□□□ -1.78
HERC6Q8IVU3 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
HERC6Q8IVU3 RNA5SP424-201ENST00000390988 115 ntBASIC3.96□□□□□ -1.78
HERC6Q8IVU3 RPS20P2-201ENST00000402520 389 ntBASIC3.96□□□□□ -1.78
HERC6Q8IVU3 AL136372.1-201ENST00000403060 228 ntBASIC3.96□□□□□ -1.78
HERC6Q8IVU3 HSPE1P26-201ENST00000405341 275 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms