Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AL078596.1-201ENST00000624856 447 ntBASIC4.15□□□□□ -1.75
VRK3Q8IV63 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.15□□□□□ -1.75
VRK3Q8IV63 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VRK3Q8IV63 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
VRK3Q8IV63 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
VRK3Q8IV63 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.14□□□□□ -1.75
VRK3Q8IV63 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
VRK3Q8IV63 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.14□□□□□ -1.75
VRK3Q8IV63 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.14□□□□□ -1.75
VRK3Q8IV63 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VRK3Q8IV63 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.14□□□□□ -1.75
VRK3Q8IV63 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VRK3Q8IV63 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.14□□□□□ -1.75
VRK3Q8IV63 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.14□□□□□ -1.75
VRK3Q8IV63 AL139276.1-201ENST00000311910 1001 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
VRK3Q8IV63 RNU6-38P-201ENST00000384085 107 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 DSTNP4-201ENST00000399472 474 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 AL356421.1-201ENST00000403255 413 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.14□□□□□ -1.75
VRK3Q8IV63 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.14□□□□□ -1.75
VRK3Q8IV63 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.14□□□□□ -1.75
VRK3Q8IV63 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.14□□□□□ -1.75
VRK3Q8IV63 AL358176.2-201ENST00000425769 204 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.14□□□□□ -1.75
VRK3Q8IV63 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.14□□□□□ -1.75
VRK3Q8IV63 RPS20P5-201ENST00000434808 360 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 GEMIN8P3-201ENST00000445417 720 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.14□□□□□ -1.75
VRK3Q8IV63 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.14□□□□□ -1.75
VRK3Q8IV63 RNU6-333P-201ENST00000459117 107 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 MTND4P17-201ENST00000470444 350 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 RPS29P19-201ENST00000479709 171 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 AC068587.1-201ENST00000483613 781 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 AC093267.1-201ENST00000489176 961 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 AC091167.1-201ENST00000492017 396 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 AC026979.1-201ENST00000492525 396 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 HMGB3P15-201ENST00000507326 574 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VRK3Q8IV63 AL592156.1-201ENST00000508758 304 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 AC021146.1-201ENST00000511202 716 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 RNU4-29P-201ENST00000515943 174 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 Y_RNA.665-201ENST00000516177 98 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 RNU6-1046P-201ENST00000516538 107 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.14□□□□□ -1.75
VRK3Q8IV63 CYCSP29-201ENST00000533731 318 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.14□□□□□ -1.75
VRK3Q8IV63 AL163153.1-201ENST00000554223 283 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 TVP23BP1-201ENST00000557500 617 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.14□□□□□ -1.75
VRK3Q8IV63 AC006270.2-201ENST00000578523 652 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 UBE2L4-201ENST00000587688 464 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 GLUD1P4-201ENST00000590914 418 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 ARF4P1-201ENST00000605447 541 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 OR6R2P-201ENST00000609216 300 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 FAM27D1-201ENST00000612308 341 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 uc_338.12-201ENST00000616344 181 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 AL132822.1-201ENST00000617063 513 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 7SK.10-201ENST00000621414 298 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 AC079597.1-201ENST00000624306 508 ntBASIC4.14□□□□□ -1.75
VRK3Q8IV63 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.14□□□□□ -1.75
VRK3Q8IV63 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VRK3Q8IV63 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
VRK3Q8IV63 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VRK3Q8IV63 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VRK3Q8IV63 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.14□□□□□ -1.75
VRK3Q8IV63 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VRK3Q8IV63 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
VRK3Q8IV63 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.13□□□□□ -1.75
VRK3Q8IV63 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
VRK3Q8IV63 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VRK3Q8IV63 RPL32P3-201ENST00000359025 275 ntBASIC4.13□□□□□ -1.75
VRK3Q8IV63 RNU6-28P-201ENST00000362378 107 ntBASIC4.13□□□□□ -1.75
VRK3Q8IV63 RNU6-522P-201ENST00000364497 107 ntBASIC4.13□□□□□ -1.75
VRK3Q8IV63 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
VRK3Q8IV63 AL592114.1-201ENST00000403842 483 ntBASIC4.13□□□□□ -1.75
VRK3Q8IV63 RNU4-26P-201ENST00000410270 107 ntBASIC4.13□□□□□ -1.75
VRK3Q8IV63 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.13□□□□□ -1.75
VRK3Q8IV63 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.13□□□□□ -1.75
VRK3Q8IV63 RBMY1KP-201ENST00000423480 476 ntBASIC4.13□□□□□ -1.75
VRK3Q8IV63 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.13□□□□□ -1.75
VRK3Q8IV63 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.13□□□□□ -1.75
VRK3Q8IV63 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.13□□□□□ -1.75
VRK3Q8IV63 AC093156.1-201ENST00000440382 670 ntBASIC4.13□□□□□ -1.75
VRK3Q8IV63 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.13□□□□□ -1.75
VRK3Q8IV63 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
VRK3Q8IV63 RPS26P56-201ENST00000444468 240 ntBASIC4.13□□□□□ -1.75
VRK3Q8IV63 NANOGP10-201ENST00000453325 895 ntBASIC4.13□□□□□ -1.75
VRK3Q8IV63 AC009963.2-201ENST00000453431 138 ntBASIC4.13□□□□□ -1.75
VRK3Q8IV63 AC109327.1-201ENST00000471666 403 ntBASIC4.13□□□□□ -1.75
VRK3Q8IV63 AC012181.1-201ENST00000479895 423 ntBASIC4.13□□□□□ -1.75
VRK3Q8IV63 AF213884.1-201ENST00000488102 463 ntBASIC4.13□□□□□ -1.75
VRK3Q8IV63 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.13□□□□□ -1.75
VRK3Q8IV63 AC083829.1-201ENST00000503756 657 ntBASIC4.13□□□□□ -1.75
VRK3Q8IV63 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.13□□□□□ -1.75
VRK3Q8IV63 RNU6-559P-201ENST00000516151 98 ntBASIC4.13□□□□□ -1.75
VRK3Q8IV63 RN7SKP219-201ENST00000516825 296 ntBASIC4.13□□□□□ -1.75
VRK3Q8IV63 MYL12AP1-201ENST00000518490 515 ntBASIC4.13□□□□□ -1.75
VRK3Q8IV63 NARSP2-201ENST00000518524 679 ntBASIC4.13□□□□□ -1.75
VRK3Q8IV63 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms