Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 RNU6-678P-201ENST00000516832 109 ntBASIC3.56□□□□□ -1.84
PRPF39Q86UA1 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.56□□□□□ -1.84
PRPF39Q86UA1 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.56□□□□□ -1.84
PRPF39Q86UA1 MTATP6P15-201ENST00000527233 835 ntBASIC3.56□□□□□ -1.84
PRPF39Q86UA1 AC087276.1-201ENST00000529659 480 ntBASIC3.56□□□□□ -1.84
PRPF39Q86UA1 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.56□□□□□ -1.84
PRPF39Q86UA1 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.56□□□□□ -1.84
PRPF39Q86UA1 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PRPF39Q86UA1 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.56□□□□□ -1.84
PRPF39Q86UA1 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.56□□□□□ -1.84
PRPF39Q86UA1 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.56□□□□□ -1.84
PRPF39Q86UA1 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.56□□□□□ -1.84
PRPF39Q86UA1 RPL23AP84-201ENST00000571193 464 ntBASIC3.56□□□□□ -1.84
PRPF39Q86UA1 MTATP6P24-201ENST00000576835 677 ntBASIC3.56□□□□□ -1.84
PRPF39Q86UA1 ISCA1P3-201ENST00000577104 373 ntBASIC3.56□□□□□ -1.84
PRPF39Q86UA1 MIR5195-201ENST00000583555 115 ntBASIC3.56□□□□□ -1.84
PRPF39Q86UA1 AL031985.2-201ENST00000600955 480 ntBASIC3.56□□□□□ -1.84
PRPF39Q86UA1 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.56□□□□□ -1.84
PRPF39Q86UA1 AC063944.3-201ENST00000609969 533 ntBASIC3.56□□□□□ -1.84
PRPF39Q86UA1 AL603758.1-201ENST00000618654 241 ntBASIC3.56□□□□□ -1.84
PRPF39Q86UA1 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.56□□□□□ -1.84
PRPF39Q86UA1 MIR7153-201ENST00000637758 57 ntBASIC3.56□□□□□ -1.84
PRPF39Q86UA1 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
PRPF39Q86UA1 AC009902.3-201ENST00000606235 2172 ntBASIC3.56□□□□□ -1.84
PRPF39Q86UA1 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PRPF39Q86UA1 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
PRPF39Q86UA1 OR4G2P-202ENST00000641004 1759 ntBASIC3.56□□□□□ -1.84
PRPF39Q86UA1 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
PRPF39Q86UA1 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.55□□□□□ -1.84
PRPF39Q86UA1 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PRPF39Q86UA1 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PRPF39Q86UA1 RNU6-1197P-201ENST00000391183 107 ntBASIC3.55□□□□□ -1.84
PRPF39Q86UA1 AC009237.5-201ENST00000414271 501 ntBASIC3.55□□□□□ -1.84
PRPF39Q86UA1 RPS15AP6-201ENST00000420703 385 ntBASIC3.55□□□□□ -1.84
PRPF39Q86UA1 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.55□□□□□ -1.84
PRPF39Q86UA1 ARF4P2-201ENST00000430209 526 ntBASIC3.55□□□□□ -1.84
PRPF39Q86UA1 ATP5JP1-201ENST00000431631 322 ntBASIC3.55□□□□□ -1.84
PRPF39Q86UA1 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.55□□□□□ -1.84
PRPF39Q86UA1 FAM103A2P-201ENST00000444122 354 ntBASIC3.55□□□□□ -1.84
PRPF39Q86UA1 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.55□□□□□ -1.84
PRPF39Q86UA1 RN7SL601P-201ENST00000471221 293 ntBASIC3.55□□□□□ -1.84
PRPF39Q86UA1 AC023598.1-201ENST00000472521 361 ntBASIC3.55□□□□□ -1.84
PRPF39Q86UA1 AP000563.1-201ENST00000490865 758 ntBASIC3.55□□□□□ -1.84
PRPF39Q86UA1 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.55□□□□□ -1.84
PRPF39Q86UA1 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.55□□□□□ -1.84
PRPF39Q86UA1 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.55□□□□□ -1.84
PRPF39Q86UA1 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.55□□□□□ -1.84
PRPF39Q86UA1 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.55□□□□□ -1.84
PRPF39Q86UA1 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.55□□□□□ -1.84
PRPF39Q86UA1 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.55□□□□□ -1.84
PRPF39Q86UA1 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.55□□□□□ -1.84
PRPF39Q86UA1 MIR5047-201ENST00000579212 100 ntBASIC3.55□□□□□ -1.84
PRPF39Q86UA1 MIR544B-201ENST00000582372 78 ntBASIC3.55□□□□□ -1.84
PRPF39Q86UA1 AC067852.3-201ENST00000589177 561 ntBASIC3.55□□□□□ -1.84
PRPF39Q86UA1 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.55□□□□□ -1.84
PRPF39Q86UA1 AC021171.1-201ENST00000603137 706 ntBASIC3.55□□□□□ -1.84
PRPF39Q86UA1 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.55□□□□□ -1.84
PRPF39Q86UA1 AC009159.2-201ENST00000617603 606 ntBASIC3.55□□□□□ -1.84
PRPF39Q86UA1 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.55□□□□□ -1.84
PRPF39Q86UA1 AC058791.1-201ENST00000608412 3198 ntBASIC3.55□□□□□ -1.84
PRPF39Q86UA1 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.55□□□□□ -1.84
PRPF39Q86UA1 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.55□□□□□ -1.84
PRPF39Q86UA1 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PRPF39Q86UA1 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRPF39Q86UA1 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRPF39Q86UA1 AC092125.1-201ENST00000562568 1995 ntBASIC3.54□□□□□ -1.84
PRPF39Q86UA1 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PRPF39Q86UA1 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRPF39Q86UA1 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
PRPF39Q86UA1 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRPF39Q86UA1 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.54□□□□□ -1.84
PRPF39Q86UA1 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRPF39Q86UA1 SNORA23-201ENST00000365128 182 ntBASIC3.54□□□□□ -1.84
PRPF39Q86UA1 TAS2R15P-201ENST00000390674 928 ntBASIC3.54□□□□□ -1.84
PRPF39Q86UA1 RNA5SP38-201ENST00000410750 119 ntBASIC3.54□□□□□ -1.84
PRPF39Q86UA1 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.54□□□□□ -1.84
PRPF39Q86UA1 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.54□□□□□ -1.84
PRPF39Q86UA1 USP9YP36-201ENST00000424581 829 ntBASIC3.54□□□□□ -1.84
PRPF39Q86UA1 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.54□□□□□ -1.84
PRPF39Q86UA1 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.54□□□□□ -1.84
PRPF39Q86UA1 AC005019.1-201ENST00000436455 431 ntBASIC3.54□□□□□ -1.84
PRPF39Q86UA1 AL357552.1-201ENST00000445254 415 ntBASIC3.54□□□□□ -1.84
PRPF39Q86UA1 RPL36AP33-201ENST00000450395 310 ntBASIC3.54□□□□□ -1.84
PRPF39Q86UA1 RPS4XP2-201ENST00000458402 793 ntBASIC3.54□□□□□ -1.84
PRPF39Q86UA1 HSPD1P15-201ENST00000505573 1122 ntBASIC3.54□□□□□ -1.84
PRPF39Q86UA1 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PRPF39Q86UA1 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRPF39Q86UA1 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.54□□□□□ -1.84
PRPF39Q86UA1 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.54□□□□□ -1.84
PRPF39Q86UA1 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.54□□□□□ -1.84
PRPF39Q86UA1 AC002400.1-201ENST00000569310 726 ntBASIC3.54□□□□□ -1.84
PRPF39Q86UA1 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.54□□□□□ -1.84
PRPF39Q86UA1 AL450489.1-201ENST00000612071 468 ntBASIC3.54□□□□□ -1.84
PRPF39Q86UA1 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.54□□□□□ -1.84
PRPF39Q86UA1 AC091953.5-201ENST00000622919 233 ntBASIC3.54□□□□□ -1.84
PRPF39Q86UA1 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.54□□□□□ -1.84
PRPF39Q86UA1 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.54□□□□□ -1.84
PRPF39Q86UA1 AC118273.1-201ENST00000525324 3006 ntBASIC3.54□□□□□ -1.84
PRPF39Q86UA1 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRPF39Q86UA1 SDAD1P2-201ENST00000441308 2028 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms