Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 AC093831.2-201ENST00000624393 3427 ntBASIC3.67□□□□□ -1.82
NPHP3Q7Z494 FAM133CP-201ENST00000332869 704 ntBASIC3.67□□□□□ -1.82
NPHP3Q7Z494 RNU6-251P-201ENST00000363235 104 ntBASIC3.67□□□□□ -1.82
NPHP3Q7Z494 SNORD82-201ENST00000365530 70 ntBASIC3.67□□□□□ -1.82
NPHP3Q7Z494 SUGT1P1-201ENST00000379514 476 ntBASIC3.67□□□□□ -1.82
NPHP3Q7Z494 RPL31P1-201ENST00000398116 372 ntBASIC3.67□□□□□ -1.82
NPHP3Q7Z494 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.67□□□□□ -1.82
NPHP3Q7Z494 RAP1BP1-201ENST00000412709 553 ntBASIC3.67□□□□□ -1.82
NPHP3Q7Z494 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.67□□□□□ -1.82
NPHP3Q7Z494 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.67□□□□□ -1.82
NPHP3Q7Z494 AC112220.1-201ENST00000434628 355 ntBASIC3.67□□□□□ -1.82
NPHP3Q7Z494 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.67□□□□□ -1.82
NPHP3Q7Z494 AL590639.1-201ENST00000456484 337 ntBASIC3.67□□□□□ -1.82
NPHP3Q7Z494 SNORD11.1-201ENST00000459482 85 ntBASIC3.67□□□□□ -1.82
NPHP3Q7Z494 RN7SL330P-201ENST00000469709 307 ntBASIC3.67□□□□□ -1.82
NPHP3Q7Z494 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.67□□□□□ -1.82
NPHP3Q7Z494 AC010285.1-201ENST00000470580 392 ntBASIC3.67□□□□□ -1.82
NPHP3Q7Z494 VN1R17P-201ENST00000472048 1090 ntBASIC3.67□□□□□ -1.82
NPHP3Q7Z494 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NPHP3Q7Z494 HMGB3P15-201ENST00000507326 574 ntBASIC3.67□□□□□ -1.82
NPHP3Q7Z494 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.67□□□□□ -1.82
NPHP3Q7Z494 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.67□□□□□ -1.82
NPHP3Q7Z494 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.67□□□□□ -1.82
NPHP3Q7Z494 ZNF192P1-203ENST00000565888 810 ntBASIC3.67□□□□□ -1.82
NPHP3Q7Z494 MIR3690-201ENST00000580266 75 ntBASIC3.67□□□□□ -1.82
NPHP3Q7Z494 ZNF861P-201ENST00000588126 639 ntBASIC3.67□□□□□ -1.82
NPHP3Q7Z494 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.67□□□□□ -1.82
NPHP3Q7Z494 AC234772.3-201ENST00000602277 528 ntBASIC3.67□□□□□ -1.82
NPHP3Q7Z494 AC007621.1-201ENST00000604544 437 ntBASIC3.67□□□□□ -1.82
NPHP3Q7Z494 AC012531.5-201ENST00000611375 151 ntBASIC3.67□□□□□ -1.82
NPHP3Q7Z494 AC079395.3-201ENST00000615161 484 ntBASIC3.67□□□□□ -1.82
NPHP3Q7Z494 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NPHP3Q7Z494 MTND2P41-201ENST00000637599 773 ntBASIC3.67□□□□□ -1.82
NPHP3Q7Z494 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NPHP3Q7Z494 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.66□□□□□ -1.82
NPHP3Q7Z494 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.66□□□□□ -1.82
NPHP3Q7Z494 AP000526.1-201ENST00000603308 1388 ntBASIC3.66□□□□□ -1.82
NPHP3Q7Z494 MIR26A1-201ENST00000362205 77 ntBASIC3.66□□□□□ -1.82
NPHP3Q7Z494 RNA5SP258-201ENST00000362750 119 ntBASIC3.66□□□□□ -1.82
NPHP3Q7Z494 RNU1-35P-201ENST00000362782 153 ntBASIC3.66□□□□□ -1.82
NPHP3Q7Z494 RNU6-657P-201ENST00000383904 107 ntBASIC3.66□□□□□ -1.82
NPHP3Q7Z494 RNU6-730P-201ENST00000383954 104 ntBASIC3.66□□□□□ -1.82
NPHP3Q7Z494 AL590084.1-201ENST00000407885 387 ntBASIC3.66□□□□□ -1.82
NPHP3Q7Z494 RNA5SP425-201ENST00000410336 112 ntBASIC3.66□□□□□ -1.82
NPHP3Q7Z494 RNU4-53P-201ENST00000410828 140 ntBASIC3.66□□□□□ -1.82
NPHP3Q7Z494 AC245054.2-201ENST00000415639 319 ntBASIC3.66□□□□□ -1.82
NPHP3Q7Z494 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
NPHP3Q7Z494 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NPHP3Q7Z494 AC006548.1-201ENST00000427470 102 ntBASIC3.66□□□□□ -1.82
NPHP3Q7Z494 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.66□□□□□ -1.82
NPHP3Q7Z494 AC084290.1-201ENST00000434995 374 ntBASIC3.66□□□□□ -1.82
NPHP3Q7Z494 AC241584.1-201ENST00000438469 1241 ntBASIC3.66□□□□□ -1.82
NPHP3Q7Z494 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.66□□□□□ -1.82
NPHP3Q7Z494 FGF7P5-201ENST00000441829 291 ntBASIC3.66□□□□□ -1.82
NPHP3Q7Z494 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.66□□□□□ -1.82
NPHP3Q7Z494 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.66□□□□□ -1.82
NPHP3Q7Z494 RFC5P1-201ENST00000454419 874 ntBASIC3.66□□□□□ -1.82
NPHP3Q7Z494 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NPHP3Q7Z494 BOLA3P3-201ENST00000505182 232 ntBASIC3.66□□□□□ -1.82
NPHP3Q7Z494 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.66□□□□□ -1.82
NPHP3Q7Z494 MTCYBP16-201ENST00000509187 1129 ntBASIC3.66□□□□□ -1.82
NPHP3Q7Z494 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.66□□□□□ -1.82
NPHP3Q7Z494 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.66□□□□□ -1.82
NPHP3Q7Z494 RN7SKP31-201ENST00000516354 278 ntBASIC3.66□□□□□ -1.82
NPHP3Q7Z494 SNORA31.20-201ENST00000517111 133 ntBASIC3.66□□□□□ -1.82
NPHP3Q7Z494 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NPHP3Q7Z494 TRAV37-201ENST00000553906 342 ntBASIC3.66□□□□□ -1.82
NPHP3Q7Z494 MTND4P33-201ENST00000556706 766 ntBASIC3.66□□□□□ -1.82
NPHP3Q7Z494 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.66□□□□□ -1.82
NPHP3Q7Z494 AC008277.2-201ENST00000605196 797 ntBASIC3.66□□□□□ -1.82
NPHP3Q7Z494 AC107952.2-201ENST00000606048 486 ntBASIC3.66□□□□□ -1.82
NPHP3Q7Z494 AL590282.1-201ENST00000610379 1136 ntBASIC3.66□□□□□ -1.82
NPHP3Q7Z494 AC073348.1-201ENST00000623002 331 ntBASIC3.66□□□□□ -1.82
NPHP3Q7Z494 CR381572.1-201ENST00000625098 102 ntBASIC3.66□□□□□ -1.82
NPHP3Q7Z494 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
NPHP3Q7Z494 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
NPHP3Q7Z494 AP006437.1-201ENST00000641440 3685 ntBASIC3.65□□□□□ -1.82
NPHP3Q7Z494 AC066616.2-201ENST00000559334 1481 ntBASIC3.65□□□□□ -1.82
NPHP3Q7Z494 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.65□□□□□ -1.83
NPHP3Q7Z494 RNU6-1249P-201ENST00000363237 111 ntBASIC3.65□□□□□ -1.83
NPHP3Q7Z494 RNU5D-1-201ENST00000363299 116 ntBASIC3.65□□□□□ -1.83
NPHP3Q7Z494 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
NPHP3Q7Z494 RNU6-821P-201ENST00000390995 107 ntBASIC3.65□□□□□ -1.83
NPHP3Q7Z494 CYCSP45-201ENST00000402289 315 ntBASIC3.65□□□□□ -1.83
NPHP3Q7Z494 RNU2-71P-201ENST00000411395 189 ntBASIC3.65□□□□□ -1.83
NPHP3Q7Z494 RPL7P10-201ENST00000417407 739 ntBASIC3.65□□□□□ -1.83
NPHP3Q7Z494 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.65□□□□□ -1.83
NPHP3Q7Z494 AL662791.1-201ENST00000441992 928 ntBASIC3.65□□□□□ -1.83
NPHP3Q7Z494 PNPLA4P1-201ENST00000458328 305 ntBASIC3.65□□□□□ -1.83
NPHP3Q7Z494 PABPC1P3-201ENST00000469174 459 ntBASIC3.65□□□□□ -1.83
NPHP3Q7Z494 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.65□□□□□ -1.83
NPHP3Q7Z494 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.65□□□□□ -1.83
NPHP3Q7Z494 AC093767.1-201ENST00000504523 156 ntBASIC3.65□□□□□ -1.83
NPHP3Q7Z494 HMGB1P22-201ENST00000505315 124 ntBASIC3.65□□□□□ -1.83
NPHP3Q7Z494 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NPHP3Q7Z494 RNU6-1225P-201ENST00000516336 65 ntBASIC3.65□□□□□ -1.83
NPHP3Q7Z494 AP001189.2-201ENST00000527320 189 ntBASIC3.65□□□□□ -1.83
NPHP3Q7Z494 AC090502.2-201ENST00000549267 280 ntBASIC3.65□□□□□ -1.83
NPHP3Q7Z494 SULT1C2P1-202ENST00000562418 459 ntBASIC3.65□□□□□ -1.83
NPHP3Q7Z494 AL132657.2-201ENST00000564417 358 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms