Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 RPS26P2-201ENST00000440331 348 ntBASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 CEACAMP7-201ENST00000444105 496 ntBASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 AL354714.3-201ENST00000447284 493 ntBASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 AC073850.1-201ENST00000449243 255 ntBASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 AC010683.1-201ENST00000473673 378 ntBASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 AC004980.4-201ENST00000513375 203 ntBASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 RNU6-123P-201ENST00000516163 102 ntBASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 AC090115.3-201ENST00000553218 849 ntBASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 MIR5692C1-201ENST00000585309 91 ntBASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 AL138889.2-201ENST00000603883 242 ntBASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 AC104687.2-201ENST00000604442 342 ntBASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 AL158032.1-201ENST00000605401 106 ntBASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 AC009229.3-201ENST00000608056 282 ntBASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 PLCE1P1-201ENST00000622094 305 ntBASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 AC018445.2-201ENST00000622987 260 ntBASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 AL359893.1-201ENST00000447628 1580 ntBASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 AC103710.2-202ENST00000641454 2853 ntBASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 IQCB2P-201ENST00000401788 1633 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 RNA5SP305-201ENST00000362665 119 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 SNORD3E-201ENST00000362899 217 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 RNU6-702P-201ENST00000364982 107 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 RNA5SP455-201ENST00000365190 119 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 RNY1P14-201ENST00000384426 108 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 Y_RNA.618-201ENST00000410949 107 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 RNA5SP111-201ENST00000411386 101 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 AC093162.1-201ENST00000419682 124 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 RPS27P18-201ENST00000431701 247 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 BX323845.1-201ENST00000432417 179 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 AC234775.1-201ENST00000454247 670 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 AC008481.1-201ENST00000463278 396 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 PPIAP21-201ENST00000464473 501 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 BX284632.1-201ENST00000478218 541 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 AC004453.1-201ENST00000487895 408 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 RN7SL244P-201ENST00000493405 297 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 AC010350.1-201ENST00000504908 231 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 AC116337.1-201ENST00000509680 687 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 COX6B1P5-201ENST00000509843 249 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 RNU6-1332P-201ENST00000516666 104 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 CR383656.7-201ENST00000548164 174 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 AL161670.1-201ENST00000554348 137 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 MTCO3P23-201ENST00000561363 289 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 MIR3941-201ENST00000582572 103 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 AL670379.6-201ENST00000603753 252 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 AL031176.1-201ENST00000604554 466 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 AL670379.1-201ENST00000604752 252 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 AL670379.5-201ENST00000605253 252 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 AL670379.8-201ENST00000605353 252 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 AL670379.7-201ENST00000605823 252 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 AC009570.1-201ENST00000609599 745 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 EIF3FP1-201ENST00000613970 806 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 SNHG22-203ENST00000617833 660 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 AP002799.1-201ENST00000623552 423 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 LINC01109-201ENST00000603837 3081 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 AC068254.2-201ENST00000623938 3577 ntBASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF111Q6ZNA4 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
RNF111Q6ZNA4 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms