Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.05□□□□□ -2.24
UBR4Q5T4S7 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.05□□□□□ -2.24
UBR4Q5T4S7 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
UBR4Q5T4S7 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.05□□□□□ -2.24
UBR4Q5T4S7 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.05□□□□□ -2.24
UBR4Q5T4S7 ZNF355P-201ENST00000427301 3216 ntBASIC1.05□□□□□ -2.24
UBR4Q5T4S7 RN7SKP285-201ENST00000410137 318 ntBASIC1.05□□□□□ -2.24
UBR4Q5T4S7 MIR1912-201ENST00000410389 80 ntBASIC1.05□□□□□ -2.24
UBR4Q5T4S7 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.05□□□□□ -2.24
UBR4Q5T4S7 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC1.05□□□□□ -2.24
UBR4Q5T4S7 AC025946.2-201ENST00000603398 234 ntBASIC1.05□□□□□ -2.24
UBR4Q5T4S7 AC010678.1-201ENST00000614118 713 ntBASIC1.05□□□□□ -2.24
UBR4Q5T4S7 U6.98-201ENST00000637157 84 ntBASIC1.05□□□□□ -2.24
UBR4Q5T4S7 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC1.05□□□□□ -2.24
UBR4Q5T4S7 SNORD21-201ENST00000383953 95 ntBASIC1.05□□□□□ -2.24
UBR4Q5T4S7 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.05□□□□□ -2.24
UBR4Q5T4S7 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC1.05□□□□□ -2.24
UBR4Q5T4S7 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC1.05□□□□□ -2.24
UBR4Q5T4S7 AL035411.2-201ENST00000604022 421 ntBASIC1.05□□□□□ -2.24
UBR4Q5T4S7 AC008121.3-201ENST00000618726 433 ntBASIC1.05□□□□□ -2.24
UBR4Q5T4S7 OR11H5P-202ENST00000641612 1325 ntBASIC1.05□□□□□ -2.24
UBR4Q5T4S7 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
UBR4Q5T4S7 HSPE1P11-201ENST00000339579 310 ntBASIC1.05□□□□□ -2.24
UBR4Q5T4S7 SNORD114-3-201ENST00000364969 75 ntBASIC1.05□□□□□ -2.24
UBR4Q5T4S7 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.05□□□□□ -2.24
UBR4Q5T4S7 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.05□□□□□ -2.24
UBR4Q5T4S7 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC1.05□□□□□ -2.24
UBR4Q5T4S7 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.05□□□□□ -2.24
UBR4Q5T4S7 AC008885.2-201ENST00000509506 930 ntBASIC1.05□□□□□ -2.24
UBR4Q5T4S7 AC007375.1-201ENST00000554513 578 ntBASIC1.05□□□□□ -2.24
UBR4Q5T4S7 AC103968.1-201ENST00000557841 573 ntBASIC1.05□□□□□ -2.24
UBR4Q5T4S7 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC1.05□□□□□ -2.24
UBR4Q5T4S7 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC1.05□□□□□ -2.24
UBR4Q5T4S7 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC1.05□□□□□ -2.24
UBR4Q5T4S7 MIR924-201ENST00000638017 53 ntBASIC1.05□□□□□ -2.24
UBR4Q5T4S7 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
UBR4Q5T4S7 FAT1P1-201ENST00000406588 507 ntBASIC1.04□□□□□ -2.24
UBR4Q5T4S7 HMGB3P23-201ENST00000414981 585 ntBASIC1.04□□□□□ -2.24
UBR4Q5T4S7 AL353718.1-201ENST00000451028 517 ntBASIC1.04□□□□□ -2.24
UBR4Q5T4S7 MTCYBP17-201ENST00000503579 789 ntBASIC1.04□□□□□ -2.24
UBR4Q5T4S7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
UBR4Q5T4S7 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
UBR4Q5T4S7 TPRKBP1-201ENST00000456243 481 ntBASIC1.04□□□□□ -2.24
UBR4Q5T4S7 AC104564.1-201ENST00000493028 407 ntBASIC1.04□□□□□ -2.24
UBR4Q5T4S7 AC091925.1-201ENST00000623204 462 ntBASIC1.04□□□□□ -2.24
UBR4Q5T4S7 AC084035.1-201ENST00000634543 607 ntBASIC1.04□□□□□ -2.24
UBR4Q5T4S7 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
UBR4Q5T4S7 MIR373-201ENST00000362273 69 ntBASIC1.04□□□□□ -2.24
UBR4Q5T4S7 RNA5SP363-201ENST00000365072 115 ntBASIC1.04□□□□□ -2.24
UBR4Q5T4S7 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC1.04□□□□□ -2.24
UBR4Q5T4S7 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.04□□□□□ -2.24
UBR4Q5T4S7 RPL23AP74-201ENST00000437246 471 ntBASIC1.04□□□□□ -2.24
UBR4Q5T4S7 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC1.04□□□□□ -2.24
UBR4Q5T4S7 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC1.04□□□□□ -2.24
UBR4Q5T4S7 RMST_9.1-201ENST00000619945 193 ntBASIC1.04□□□□□ -2.24
UBR4Q5T4S7 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
UBR4Q5T4S7 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC1.04□□□□□ -2.24
UBR4Q5T4S7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC1.04□□□□□ -2.24
UBR4Q5T4S7 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC1.04□□□□□ -2.24
UBR4Q5T4S7 AC023050.2-201ENST00000544968 387 ntBASIC1.04□□□□□ -2.24
UBR4Q5T4S7 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC1.04□□□□□ -2.24
UBR4Q5T4S7 MIR330-201ENST00000362196 94 ntBASIC1.03□□□□□ -2.24
UBR4Q5T4S7 SNORA2A-201ENST00000383885 135 ntBASIC1.03□□□□□ -2.24
UBR4Q5T4S7 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.03□□□□□ -2.24
UBR4Q5T4S7 AC068305.1-201ENST00000497406 726 ntBASIC1.03□□□□□ -2.24
UBR4Q5T4S7 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.03□□□□□ -2.24
UBR4Q5T4S7 AC087808.1-201ENST00000520501 361 ntBASIC1.03□□□□□ -2.24
UBR4Q5T4S7 AL020996.3-201ENST00000606617 222 ntBASIC1.03□□□□□ -2.24
UBR4Q5T4S7 AC097504.2-201ENST00000608088 454 ntBASIC1.03□□□□□ -2.24
UBR4Q5T4S7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.03□□□□□ -2.24
UBR4Q5T4S7 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
UBR4Q5T4S7 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
UBR4Q5T4S7 AC146507.1-201ENST00000468335 354 ntBASIC1.03□□□□□ -2.24
UBR4Q5T4S7 AC104692.1-201ENST00000472406 90 ntBASIC1.03□□□□□ -2.24
UBR4Q5T4S7 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.03□□□□□ -2.24
UBR4Q5T4S7 AC120053.1-201ENST00000607706 736 ntBASIC1.03□□□□□ -2.24
UBR4Q5T4S7 AL135786.2-201ENST00000608422 615 ntBASIC1.03□□□□□ -2.24
UBR4Q5T4S7 Z99129.2-201ENST00000619967 314 ntBASIC1.03□□□□□ -2.24
UBR4Q5T4S7 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC1.03□□□□□ -2.24
UBR4Q5T4S7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
UBR4Q5T4S7 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
UBR4Q5T4S7 MIR142-201ENST00000384835 87 ntBASIC1.03□□□□□ -2.24
UBR4Q5T4S7 AC008173.1-201ENST00000418901 264 ntBASIC1.03□□□□□ -2.24
UBR4Q5T4S7 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.03□□□□□ -2.24
UBR4Q5T4S7 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC1.03□□□□□ -2.24
UBR4Q5T4S7 MEPE-206ENST00000511670 550 ntTSL 4 BASIC1.03□□□□□ -2.24
UBR4Q5T4S7 RNU6-347P-201ENST00000516658 105 ntBASIC1.03□□□□□ -2.24
UBR4Q5T4S7 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC1.03□□□□□ -2.24
UBR4Q5T4S7 AC103810.1-201ENST00000579873 453 ntBASIC1.03□□□□□ -2.24
UBR4Q5T4S7 U73023.1-201ENST00000603134 700 ntBASIC1.03□□□□□ -2.24
UBR4Q5T4S7 AL583832.1-201ENST00000603227 784 ntBASIC1.03□□□□□ -2.24
UBR4Q5T4S7 AL353748.2-201ENST00000622148 471 ntBASIC1.03□□□□□ -2.24
UBR4Q5T4S7 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
UBR4Q5T4S7 LAP3P1-201ENST00000403648 294 ntBASIC1.03□□□□□ -2.24
UBR4Q5T4S7 FTH1P15-201ENST00000406984 280 ntBASIC1.03□□□□□ -2.24
UBR4Q5T4S7 VN1R96P-201ENST00000446052 858 ntBASIC1.03□□□□□ -2.24
UBR4Q5T4S7 AC125238.1-201ENST00000448842 249 ntBASIC1.03□□□□□ -2.24
UBR4Q5T4S7 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
UBR4Q5T4S7 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.25
UBR4Q5T4S7 Y_RNA.453-201ENST00000384223 109 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms