Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
LONRF3Q496Y0 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LONRF3Q496Y0 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
LONRF3Q496Y0 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LONRF3Q496Y0 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
LONRF3Q496Y0 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.5□□□□□ -1.69
LONRF3Q496Y0 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LONRF3Q496Y0 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
LONRF3Q496Y0 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LONRF3Q496Y0 SNORA60-201ENST00000362396 134 ntBASIC4.49□□□□□ -1.69
LONRF3Q496Y0 RNY4P24-201ENST00000362735 96 ntBASIC4.49□□□□□ -1.69
LONRF3Q496Y0 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
LONRF3Q496Y0 EIF1P1-201ENST00000421436 341 ntBASIC4.49□□□□□ -1.69
LONRF3Q496Y0 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.49□□□□□ -1.69
LONRF3Q496Y0 OR4K11P-201ENST00000431829 904 ntBASIC4.49□□□□□ -1.69
LONRF3Q496Y0 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.49□□□□□ -1.69
LONRF3Q496Y0 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.49□□□□□ -1.69
LONRF3Q496Y0 AC010655.1-201ENST00000449336 292 ntBASIC4.49□□□□□ -1.69
LONRF3Q496Y0 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.49□□□□□ -1.69
LONRF3Q496Y0 RPL38P1-201ENST00000460914 211 ntBASIC4.49□□□□□ -1.69
LONRF3Q496Y0 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.49□□□□□ -1.69
LONRF3Q496Y0 AC011352.1-201ENST00000512300 793 ntBASIC4.49□□□□□ -1.69
LONRF3Q496Y0 NPM1P41-201ENST00000512920 831 ntBASIC4.49□□□□□ -1.69
LONRF3Q496Y0 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LONRF3Q496Y0 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.49□□□□□ -1.69
LONRF3Q496Y0 SNORA31.8-201ENST00000516327 108 ntBASIC4.49□□□□□ -1.69
LONRF3Q496Y0 RNU6-506P-201ENST00000516553 94 ntBASIC4.49□□□□□ -1.69
LONRF3Q496Y0 SNORA18.6-201ENST00000516792 115 ntBASIC4.49□□□□□ -1.69
LONRF3Q496Y0 RNU6-528P-201ENST00000516926 100 ntBASIC4.49□□□□□ -1.69
LONRF3Q496Y0 AC134698.4-201ENST00000523451 826 ntBASIC4.49□□□□□ -1.69
LONRF3Q496Y0 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.49□□□□□ -1.69
LONRF3Q496Y0 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.49□□□□□ -1.69
LONRF3Q496Y0 RPL21P5-201ENST00000554662 472 ntBASIC4.49□□□□□ -1.69
LONRF3Q496Y0 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.49□□□□□ -1.69
LONRF3Q496Y0 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.49□□□□□ -1.69
LONRF3Q496Y0 AL360157.1-201ENST00000565962 87 ntBASIC4.49□□□□□ -1.69
LONRF3Q496Y0 AC120057.2-201ENST00000571520 271 ntBASIC4.49□□□□□ -1.69
LONRF3Q496Y0 MIR4429-201ENST00000580105 73 ntBASIC4.49□□□□□ -1.69
LONRF3Q496Y0 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.49□□□□□ -1.69
LONRF3Q496Y0 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.49□□□□□ -1.69
LONRF3Q496Y0 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.49□□□□□ -1.69
LONRF3Q496Y0 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LONRF3Q496Y0 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.49□□□□□ -1.69
LONRF3Q496Y0 AL158211.4-201ENST00000606988 584 ntBASIC4.49□□□□□ -1.69
LONRF3Q496Y0 MIR92B-201ENST00000607575 96 ntBASIC4.49□□□□□ -1.69
LONRF3Q496Y0 MIR6868-201ENST00000611215 58 ntBASIC4.49□□□□□ -1.69
LONRF3Q496Y0 AC099654.13-201ENST00000639774 207 ntBASIC4.49□□□□□ -1.69
LONRF3Q496Y0 CCT4P2-201ENST00000233836 1548 ntBASIC4.49□□□□□ -1.69
LONRF3Q496Y0 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LONRF3Q496Y0 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LONRF3Q496Y0 UBE3AP2-201ENST00000429033 2259 ntBASIC4.49□□□□□ -1.69
LONRF3Q496Y0 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.49□□□□□ -1.69
LONRF3Q496Y0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LONRF3Q496Y0 BDP1P-201ENST00000582658 1990 ntBASIC4.49□□□□□ -1.69
LONRF3Q496Y0 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.48□□□□□ -1.69
LONRF3Q496Y0 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LONRF3Q496Y0 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LONRF3Q496Y0 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LONRF3Q496Y0 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.48□□□□□ -1.69
LONRF3Q496Y0 RNA5SP399-201ENST00000364003 117 ntBASIC4.48□□□□□ -1.69
LONRF3Q496Y0 MIR554-201ENST00000384874 96 ntBASIC4.48□□□□□ -1.69
LONRF3Q496Y0 AL078595.1-201ENST00000404458 226 ntBASIC4.48□□□□□ -1.69
LONRF3Q496Y0 MIR1251-201ENST00000408552 70 ntBASIC4.48□□□□□ -1.69
LONRF3Q496Y0 MIR548F1-201ENST00000408667 84 ntBASIC4.48□□□□□ -1.69
LONRF3Q496Y0 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.48□□□□□ -1.69
LONRF3Q496Y0 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.48□□□□□ -1.69
LONRF3Q496Y0 AL691449.1-201ENST00000426570 421 ntBASIC4.48□□□□□ -1.69
LONRF3Q496Y0 ATP5HP2-201ENST00000433885 485 ntBASIC4.48□□□□□ -1.69
LONRF3Q496Y0 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.48□□□□□ -1.69
LONRF3Q496Y0 MTND6P13-201ENST00000443510 523 ntBASIC4.48□□□□□ -1.69
LONRF3Q496Y0 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.48□□□□□ -1.69
LONRF3Q496Y0 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.48□□□□□ -1.69
LONRF3Q496Y0 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.48□□□□□ -1.69
LONRF3Q496Y0 AC098824.1-201ENST00000453565 980 ntBASIC4.48□□□□□ -1.69
LONRF3Q496Y0 AC021382.1-201ENST00000483523 359 ntBASIC4.48□□□□□ -1.69
LONRF3Q496Y0 AC110792.1-201ENST00000491826 472 ntBASIC4.48□□□□□ -1.69
LONRF3Q496Y0 AC026801.2-201ENST00000515352 425 ntBASIC4.48□□□□□ -1.69
LONRF3Q496Y0 RNU6-1003P-201ENST00000517099 105 ntBASIC4.48□□□□□ -1.69
LONRF3Q496Y0 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
LONRF3Q496Y0 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.48□□□□□ -1.69
LONRF3Q496Y0 AP001804.3-201ENST00000525146 880 ntBASIC4.48□□□□□ -1.69
LONRF3Q496Y0 DEFB108A-201ENST00000530110 222 ntBASIC4.48□□□□□ -1.69
LONRF3Q496Y0 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
LONRF3Q496Y0 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.48□□□□□ -1.69
LONRF3Q496Y0 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.48□□□□□ -1.69
LONRF3Q496Y0 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.48□□□□□ -1.69
LONRF3Q496Y0 AL022154.1-201ENST00000604698 785 ntBASIC4.48□□□□□ -1.69
LONRF3Q496Y0 AC012443.1-201ENST00000605605 231 ntBASIC4.48□□□□□ -1.69
LONRF3Q496Y0 AC103710.1-201ENST00000610003 901 ntBASIC4.48□□□□□ -1.69
LONRF3Q496Y0 AL110115.1-201ENST00000614396 364 ntBASIC4.48□□□□□ -1.69
LONRF3Q496Y0 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.48□□□□□ -1.69
LONRF3Q496Y0 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LONRF3Q496Y0 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
LONRF3Q496Y0 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.48□□□□□ -1.69
LONRF3Q496Y0 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LONRF3Q496Y0 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LONRF3Q496Y0 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.47□□□□□ -1.69
LONRF3Q496Y0 AL353746.1-201ENST00000566293 6881 ntBASIC4.47□□□□□ -1.69
LONRF3Q496Y0 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LONRF3Q496Y0 IPO8P1-201ENST00000455509 3109 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 158.7 ms