Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC110774.1-201ENST00000623567 2018 ntBASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 Y_RNA.441-201ENST00000384123 112 ntBASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 Y_RNA.580-201ENST00000391004 95 ntBASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 U3.36-201ENST00000408418 213 ntBASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 REREP1Y-201ENST00000422655 198 ntBASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 AC006946.1-201ENST00000429106 328 ntBASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 MTND3P9-201ENST00000429526 346 ntBASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 REREP2Y-201ENST00000439103 200 ntBASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 FABP5P13-201ENST00000452144 328 ntBASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 AC005726.1-201ENST00000494679 427 ntBASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 RPS17P5-201ENST00000498293 408 ntBASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 CYCTP-201ENST00000504253 315 ntBASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 RNY3P16-201ENST00000516338 101 ntBASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 AL133153.1-201ENST00000557756 303 ntBASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 AL162424.1-201ENST00000602325 221 ntBASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 AL158032.1-201ENST00000605401 106 ntBASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 AC084757.4-201ENST00000616350 526 ntBASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 AC004656.1-201ENST00000568479 4951 ntBASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 AC026951.1-201ENST00000559530 2459 ntBASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 AC010329.2-201ENST00000595195 2737 ntBASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 AP005432.1-201ENST00000580891 3485 ntBASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 Y_RNA.127-201ENST00000363386 109 ntBASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 AL033519.2-201ENST00000403958 392 ntBASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 RNA5SP107-201ENST00000411358 122 ntBASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 AC138761.5-201ENST00000433967 325 ntBASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 DAP3P1-201ENST00000441522 278 ntBASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 RPL12P39-201ENST00000455456 496 ntBASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 AL139099.1-201ENST00000497398 403 ntBASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 Y_RNA.679-201ENST00000516416 91 ntBASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 RNU6-347P-201ENST00000516658 105 ntBASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 snoU109.6-201ENST00000516831 118 ntBASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 AC098826.3-201ENST00000603823 466 ntBASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 AC091953.3-201ENST00000623220 236 ntBASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 U6.92-201ENST00000636464 89 ntBASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
CTC1Q2NKJ3 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
CTC1Q2NKJ3 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.9□□□□□ -1.47
CTC1Q2NKJ3 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CTC1Q2NKJ3 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CTC1Q2NKJ3 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CTC1Q2NKJ3 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
CTC1Q2NKJ3 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CTC1Q2NKJ3 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 XIAPP3-201ENST00000312918 795 ntBASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 Y_RNA.215-201ENST00000364204 112 ntBASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 RNU6-290P-201ENST00000365212 101 ntBASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 SNORA67-201ENST00000384423 137 ntBASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 SNORD73A-201ENST00000386062 65 ntBASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 DUTP5-201ENST00000406790 469 ntBASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 EI24P1-201ENST00000416584 867 ntBASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms